Microarray Probes on PGSC0003DMT400057440
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_15155_PI426222305 |
JHI_St_60k_v1 |
CGTGTATTGTTCGGATCGACTAACTATAGTTTTTGCTTTTACAGTGACATATTTTGAGCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400057440
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400057440 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G20300.1 |
+2 |
7e-90 |
286 |
180/258 (70%) |
Protein of unknown function (DUF3537) | chr3:7079832-7081809 REVERSE LENGTH=452 |
Transcript Sequence (1610 bp)
>PGSC0003DMT400057440 1610 pgsc_dm_v3.4
CTTTGTTGAAATTGGTAATTAGTGTGGAAATGTATATCGAACTGCATGATGTAATGTAAC
GATAATCCTTTTTTTCGATATGCAGAGATCGTTGAAGATCCTATTCATATTTGTCCTGCC
ATGTTTCGCTGCTGAAAGCATATATAAAATTTGGTGGTACAGTTCAGGTGGAACTCAAAT
CCCCTTTTTAGGCAATGTCATTGTGAGTGACATTGTCGCGTGCCTTCTGGAGCTGAGCTC
ATGGCTTTACAGGACGACTGTGTTCTTCCTAGTGTGTGTCCTTTTTCGCTTGATTTGTTA
CCTTCAGATTCTCCGATTGAGAGATTTTTCTCAGATATTCCACATTGATTCTGATGTTGA
GACGGTGTTGAGAGAGCACCTTAGAATCAGGAGGCACTTGCGGATCATTAGCCATAGGTA
CCGTAGATTTATCTTGTTGGGATTGGTATTTGTCACAGCAAGTCAATTTGCGTCCCTTCT
CATGACTACACGATCAACTGCTGATCTTCATATCTACAAGAGTGGTGAACTCGCGCTATG
CTCTCTGAGCCTTCTTGCCGGGCTGTTGATACTGTTGAGAGGTGCAGTCAGAATTACCCA
TAAGGCACAAGCTGTTACATGCTTGGCGGCTAAGTGGCACGTGTGTGCAACAGTTGACTC
TTTTGAAGCAGTTGAGGGTGAAACTCCTCCAATATCTCAAATAGCCAGCAACCAAGTTTT
CCCTGTCACTTCCGAAGGGTCATCTGATGCTGATGATGTTGGAGATGAGGAAGATGAGTT
CGACAACACAAAATTTGTCCACTCATATGCATATAGCACAATTTCATTCCAGAAAAGGCA
GGCACTAGGTATACTGGTTTCACTTGTTTCTTTTTTATCCCCAGTGTTTTCAAAAGCAAA
AAGAGCAACGAGGGTACGTAGGACTTGAAAGCTAAAAACAAGTGGTGAAACGTACACCTC
TTCGATATGATGTGTACGATATGTGAGGTTAAAGACCATCTATATATGATGGTCAGACTC
TTCCAAAATGCTATGTTGCTCAGACTTTTAGCCTATATTGCTCGGACTCTTAAAAAATGC
TACCAAGACTTTATTACGTGTATTGTTCGGATCGACTAACTATAGTTTTTGCTTTTACAG
TGACATATTTTGAGCATAACAGAGCAGGAATTACTCTATATGGCTTTATGCTGGATAGAT
CCTATCTTCACACTATTTTTGGTATGGAACTAGCACTGGTCCTCTGGTTGCTTGGAAAAA
CTGTTGCTTCCATTGCTTGAATCATTGGGTATTGATTTGTTACGTTCCTCGGACTCTCCA
AAAATGATGCCGCACTCGTGTCAGATCCTTCAAAAACATACTACTTTAGAGGATTCGACA
CGCATCCTACGACATTTTCGAAGTGTTTGATCAACTTTTGGTTGAATTGAGAAGGTTTCT
GTTATTGCTTGTGCTATTGTTTAGAGTGTAACATATTACATATTCAATCAGAAATTAAGA
TGCTTGTGTGGAATATGTGGGTGAATATGTATAGAGCTATTTTATTTATTCAATTTTGTA
TTATATTATACTGGATCTATAAGAGGTAAAATGATGTTATTTACTTGTTA
