Microarray Probes on PGSC0003DMT400057398

Probe IDChipProbe Sequence
CUST_14971_PI426222305 JHI_St_60k_v1 CCTTGTTGGAATATATGATAGTTTGATTCTAACGTGTTTGAGATTGAGACGGGATAGTTG

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400057398

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Source Transcript PGSC0003DMT400057398 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT5G41761.1 +2 4e-21 86 46/91 (51%) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:16711437-16711742 FORWARD LENGTH=101

Transcript Sequence (691 bp)

>PGSC0003DMT400057398 691 pgsc_dm_v3.4
AAACTTTCGCATTTTCATCTTCACCAAATAATACTATTAAATGTATTTTCCAACAATGGC
TCTAAGTTGGGTTGTTACCATTGCAAACACAATTACTCTTGGAAACTCGAAATCAACACT
ATCATCAATCGAATTCAACAAAAATCAAATGAATCAGAGTATCATTTCCATTTCGAATGA
AAAAAATTCCGAGTTTTTTCAAATGCCTCTTCATTATCCAAGATACACAAAACATGATTA
CGAGAAGATGGAGGAATGGAAGATTGATGCGCTTCTAAGAGAATATGGACTTAATTTTCA
GGGGACTGTTGATGAGAAGAGGAAATTTGCTATAGGTGCATTTGTGTGGCATGATCAACT
TTGATTTTTGTCCTAATTTGGTTATATATGTTCTGGTTTTGAGATTGAGACGGAGTTGTT
ATTATTGTTGTTGTTATAGATGTCTTTATGACTAGTTCGAGTTTAAATTTGTCCTCCTTG
TTGGAATATATGATAGTTTGATTCTAACGTGTTTGAGATTGAGACGGGATAGTTGTTGTT
ATAGATGTCTTCATTTGTGGCTAGACAAGTTTAAATTTGACCTAATTGGTCATGAATGCT
CTGTTTTTTCTTATATACTTATAGCGGAATTTAATGTGCTTGAAATTGAAACGGAGTATT
TATTGTTGTTACAAATATTGTAATATTTGTC