Microarray Probes on PGSC0003DMT400056685
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_34313_PI426222305 |
JHI_St_60k_v1 |
GCGCCTAGTATTACGACTATTTCCCCCCTATTATATATACTTTAAACTATAGTCATAGAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400056685
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400056685 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G56960.1 |
+2 |
5e-46 |
167 |
146/409 (36%) |
basic helix-loop-helix (bHLH) DNA-binding family protein | chr5:23038703-23041174 REVERSE LENGTH=466 |
Transcript Sequence (1351 bp)
>PGSC0003DMT400056685 1351 pgsc_dm_v3.4
TATATGTATGGGATGCAGCATAGGAGAAATTGAATTTGGAATGACTTGTAGCCCCCAAGT
AAATTTGGAAATGGGGATGAAAAACTTGTTTCCGGAATACTTCTCAACAAGATCTCATCA
TCAGACATTGCTTACAAATATTGATCAAAATAGGCCATCGCCATCTTCATCATTCTCTCT
CGATAGCCCAGGAGAATACTCATCGCTTTTATTCAATCCACCCCAAACAGATGCCTTCCC
CGAGCAGACCATAAGACCAGTTTCTGCCACGGCCATGCCATTCCATCAGCAACAACCTAT
TGATCATCAGACATTAACTCAACTCCGAGGCAGCATTCAATTCCCGGGGGTAGAAACTGA
AGATGCTGCATTGACAAGAGCGTATCTCGCTGTCATGACATCACCTTCTTCTTCATCGTC
ATCTCACCAATCGCGAGAAAATATTAATGTACCAACAGATTATCATTATCAAAAGGCCAC
TGCATTCAGAAGGTTTAGACCAGGTTTAGGTCGTCCTAGTAATGTGCAAATAGGCACATC
CAGAACAATTCGTCGAGAAAACATGTTGAGAAGATCAATTACATTCTTCAGGAATTTAAA
TATGATGAGAAGGCAAGAACAAATCCAAGCGAATCAGCGTGCCCCTACTAGCACTCAAGT
TCATCATATGATTTCAGAAAGAAGAAGACGCGAAAAACTCAACGATAGCTTTCAACTACT
TAGATCTTTACTCCCTCCTGGTACAAAGAAGGACAAAGCATCTGTTCTTTCCAGTACAAC
AGAATACTTAACTTCTTTGAAAGGTCAAGTGGAAGAACTTAGCAAAAAGAATGAAATGCT
GAAAGCAGAGTTAGATAAACCAGAAGACATGATGAAATCCGATGCGATTAGCTCATGTGA
TGGAAATGAAAGAGTAGCTGTTGAAATAACAAATGTAAGTGAATCAAGTTTATCAGAATC
AAGAGTAGTGAAATTGCAAGTTTCAGTAAGAGGAGAATGCAACGTCTTGGATTTGGCCAC
TCGTTCACTCGAATTCTTGAAAACTCAAAACGATCTAACCTTAGAGTCAGTAGCAGCAAA
CACCAGGCCGTCCATGGTTACTCACATTACTTTGAGAATTAGAATTCAGGGTAGTGAATG
GGACGAGTCTGGTTTCGAGGAAGCAGTGAAAAGGGTTGTTGATGACTTGTCATAGTTGGT
AGGGCCATCAAATTTTGACTGGCGGCGCCTAGTATTACGACTATTTCCCCCCTATTATAT
ATACTTTAAACTATAGTCATAGAGATCATCAATTAATATCCTAAAATTACAATCATGTCA
TTGCACAATTTTGTTGCTAGTTTTACCTCCT
