Microarray Probes on PGSC0003DMT400056385
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_21949_PI426222305 |
JHI_St_60k_v1 |
GGCTGTCAACATTTATACATATCCATGCTCCATCTTCAATACTACATACTTTGCTTTGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400056385
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400056385 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G07525.2 |
+1 |
4e-45 |
160 |
74/136 (54%) |
autophagocytosis-associated family protein | chr3:2399277-2400380 REVERSE LENGTH=226 |
Transcript Sequence (1578 bp)
>PGSC0003DMT400056385 1578 pgsc_dm_v3.4
CATAAATCTACTATTTCCACTACTTCCACTATGGAAAAATGAAAATAATAATATCATCAA
TATAAGCTAGGTGGTCTGCGTACACTCTTCCCTCCTTAGACCCTAATTGTGGAATTTCTC
TAGGTATGTTGTTGCATTATCACTGACATCCCATTGTGAGTGGTGTTTCTCGCGATGATT
GAATCCCTGGGTGGGGATTTCGCCGTCGATGTTGTGTTTACAGTTGTTACGTGGCACACG
GAACTTCTCTAGAAATACCGTCAGTTGGTTGTGTCGCTCCAGCAAGGGGAGCAATTCGGT
TAAGTGGATGTGCCGGAAGGCCTCTGTCCAGTGGCTCCATAAGGTGCTATGCCTTAGACT
CACTGAAAAAGTTACCGTTGTGTATTAAGGTTTTTGTTTGTGTGGAGAGTGTTTACTTAG
AGAGAGAAAAAGTTATGGATACAAGTTTCTTACGAGATTGGTTTACATGTTAATTTCTTG
CAATCAGGCAATAAGTTTAATGAGATCATTTATTCCTGTCCTTGGCATTAAAGACTTTCA
ATTTTTGGATATGGCTGTTAATTTGATAGATGGTGGTGCTCTTATCAACAATATGCTCCT
CTTAAGTACTCTAGCCACACTAATTAAACATCAATTGCCTTCAATCGGTTACAACGATGA
CTTTTGTGTCTGATGGAGTTTTAGATTCATTATCTTTTATAGTTCCATTCCAGTATGTGG
CTGTCAACATTTATACATATCCATGCTCCATCTTCAATACTACATACTTTGCTTTGATAT
ATCTGTTCCAGTTTTCATCTCTTAATTGTCTTTGAACTATAAATGGTTGAACATTGTCAT
GATTTTCCTTTAAAGGTTCAAAAGGACAGCAAAGAAAGACATCATTACGACTTTCATGTC
ATCTACAGTTCCTCTTTCAGGGTTCCAGTACTTTATTTCCGTGCATACTGCAGTGATGGA
GAACCCTTGGCAATAGAAGACCTGGAAAAGGACTTTCCTGCCTATACTGCACAGGAACTA
GCAGTATCTAAATGGACCTTTATAACTCGGGAGGAGCACCCGTACCTGAATCGGCCATGG
TATACTTTGCATCCATGTGGGACTAGTGAGTGGATGAAGCTGCTTTTCAGTAATGAACCT
TCAGTGGTGTCTCAAGGTGGAGTTGCAATTGAGAAGTATCTAACCTCATGGTTTTCAGTT
GTATCACCGGTCTTTGGTTTTAAAATCCCCTTAAAATTCTCTACATTTATGAACTCTACA
CCCAGCAAGTCTGGAAATGTTGCTACTGTAATATAGATTTAGTTTTTTCTTTTCAATGTA
AATGTTTAGAATGAAATCATCTGCTAAGATGCAAAATTGGTGGGGCTTATGTCAGATGTT
AGGCCTTACATAAAATTAATCTTTTAATGTGAATAGGCAGAAGTAGATTTTAAAATTTTA
ATTTCTGTTAAAAGTCTTGGCATTGCAGATTACTTCAATGAGCTTCTCTTACCTTACATG
ATGTATGCTGGTGAGGATTACATTCACAGTTGCAAAATGTCAAAAAAACTTATATTGAAA
ATATATAAGCACACTTTG
