Microarray Probes on PGSC0003DMT400056372
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_25014_PI426222305 |
JHI_St_60k_v1 |
CCGTTAATCTTGAATCCATCCAACCAAATGCTATTCCATTTCAGAATGTTTAGCTTCTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400056372
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400056372 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G50670.1 |
+3 |
3e-12 |
67 |
28/36 (78%) |
Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein | chr5:20615897-20617133 REVERSE LENGTH=359 |
Transcript Sequence (1153 bp)
>PGSC0003DMT400056372 1153 pgsc_dm_v3.4
GATAATTGAAGCTTTGACTATAAGGTTTCTGCAGTTGTCCCATCCCCAATAAATTTATGT
TACAGCATTGTCTCATTCTGATTGGATCCTTTTGTAGGTTTCATTCATTGGTAGAATTTG
ATGACGGAAAGAGAAGCTGTCGGAAACGTCTTGATGGACATAACAGGCGTCGAAGGAAGC
CTCAGCCAGATTCTATGGCAAAAAATTCTGGATTACTTTTTGGCCAACAAGGTTAGGGTC
ATTTGTTTATATAATAGTAATAAAAAATGAAACATGAATGCATTTCCACCTTATTCTTAG
AATTGGATACCGTTATTATATTTGTATGTTTAATCAAATGATGGTATGATCAAAAGGCTG
AATCATTTGTAGGAACGAAACTCCTGTCATTTAGCAGTCAACAAATATTTCCAAGTGCAG
TTGTGAGCTCTGCATGGGCTGGCGTTGTCAAAACAGACAGCGATATGGTATTATACAACA
ACCAATCACATATGAATGGTATGGACAGTCAAAACTCGTTCCCTGATTCTTCGGGTCATA
GCTATACAGGAGGAAGCCAATTCCAGTTCATGCAAGGCAGTGATCATAGTCTGACTGAAT
CTTCTTCGATCTGCCAGCCACTTTTTGAACATCCCACTTCTGCAGCAGGAATTTCTAGCA
GCGGACAAAAGATCTTCTCCAGTGGATTAAATGATATTGTTGATTCTGATCGTGCTCTCT
CTCTTCTGTCATCAGCACCCGCTGTAACTAGGGAGATTGGTTTGAGCCACATGGTGCAGC
AGCCTGCCTCTATCCCACGTTCCCAGTCACAGGGCCTGCAGTATGATGGTCTAAGCCATT
TCCCTTTTGGTCAAGATTTCAATAGCAAACCTCAAGATTCACATGTTAGCAACAGCAGCA
ACCCTCTCCATTTCCATGATATGTTGCAAAATGCACAAGATGGATCATCTACAAGTGGTG
GCTCTCAGCAAACACTAGCCTTTATGTGGGACTAAACTTTTAACATCAAGGATATTCCGT
TAATCTTGAATCCATCCAACCAAATGCTATTCCATTTCAGAATGTTTAGCTTCTAATTAG
AGTTGAATGTTTGTGTGATATATCACTTAACTTTTCTATATTTTCCCTTCATTATGACAA
TTCTCTCTTCTCT
