Microarray Probes on PGSC0003DMT400055958
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23797_PI426222305 |
JHI_St_60k_v1 |
CTCATTTCCTTACTTGGAAGTTATAGCTGTATCACAATAGCCATTATCATTTCACCTGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400055958
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400055958 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G12030.1 |
+1 |
4e-46 |
155 |
91/148 (61%) |
heat shock protein 17.6A | chr5:3884214-3884684 REVERSE LENGTH=156 |
Transcript Sequence (905 bp)
>PGSC0003DMT400055958 905 pgsc_dm_v3.4
TAGAAACAAGGTGATGAAGAGAAAGAAGCTCCTCGAAACTTTCCTTCTTCTTCTATTTTC
CTCTAGAAATTTCCACACTTGTGTTATATATATCTACCTCTCCTGTAATCAGAATGGAAG
TCTAATTTGAACAATTTCAAACACGAAATCACAACATCCAAGAAGTGAAGAATGGATTTG
AGGTTGCTGGGTATCGATAACACACCACTCTTCCACACTCTCCAGCATATGATGGAAGCT
GCCGGTGAAGATTCCGACAAGTCGGTCAATGCACCATCAAGGAACTACGTTCGTGATGCT
AAGGCCATGGCTGCTACACCAGCGGACGTGAAGGAGTATCCTAATTCGTATGTTTTTGTT
GTGGATATGCCAGGGTTGAAATCTGGAGATATTAAAGTGCAGGTGGAAGAAGACAATGTG
CTGTTGATTAGCGGAGAAAGGAAGAGGGAAGAAGAGAAAGAAGAGGCAAAGTTTATTAGG
ATGGAGAGAAGGGTTGGGAAATTCATGAGGAAGTTTAGTCTGCCAGAGAATGCGAATACT
GATGCGATTTCTGCTGTTTGTCAAGATGGAGTTCTGACTGTTACTGTTCAGAAATTGCCT
CCTCCTCAGCCAAAGAAACCAAAAACAATTGAGGTGAAAGTTGCTTGAAGTTATGGACTC
TGTTTTATGAATGGAGCTTCTCTGTTTTGATGGTTTAAACATGGATTTAATAAAGTGATT
GCTGCTCTAGATTTACCATATTTTGATGCATCCAAAGTGTGAAGGATTAACCAAAAATTG
TTAGTGCGTGTATCTTGTTTGATACTGAATTGAATTTTCATTACTTTTTTTTGTCTCATT
TCCTTACTTGGAAGTTATAGCTGTATCACAATAGCCATTATCATTTCACCTGATTTATAA
AATAG
