Microarray Probes on PGSC0003DMT400055825
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_48453_PI426222305 |
JHI_St_60k_v1 |
GTGTTCTTTTGCGTTTTTCCTTATCATGTAAGATTCGTGGTACTTCAGCAACATTGAAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400055825
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400055825 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G23880.1 |
+1 |
1e-33 |
130 |
98/319 (31%) |
F-box and associated interaction domains-containing protein | chr3:8622061-8623155 REVERSE LENGTH=364 |
Transcript Sequence (1367 bp)
>PGSC0003DMT400055825 1367 pgsc_dm_v3.4
ATTGCATCCATAAAATAGTGATTCTATTGATTCAATAAGCAAATTGAATCATAAAAAATG
GAACAAACTTCTCAAGGGTCAACAATTTTTCCCCCAGAAATCATTTTTGAGATTTTCTTG
AGGTTACCTGTCAAATCCCTTTTGAAATTCAAGTGTGTTTCGAAATCTTGGTTTTTTTTG
CTCTCAAATCCTTTATTCAGCAAAACCCATGTCGATTTTTGCTTAAAGAACCCCAAATTG
ACTGATTATAGACTTGCTGTGGTAGCTTCTGTTTATGGTTTAGGTAGAAAATGCAATTTT
TACAACATGGGGTTTGAAAATTCATGTCTTAGTGTGGCTAGAAATAGTTGTCCTGCTAAA
TCTTTAGCTATCTCAGCTAGGATTTTGGGTTCTTGTAATGGGTTGATTTGTTTAACTAGT
GACTCGTTTACTGTAATGTTATTGAATCCCTGTACTGGAAAGTTTAATTTGTTTCCTGAT
TCAATGCTTCGGAGTAATGGCGGCGGCGGTGGTGGTAGTGGTGTTGGTTGTTTTATTAGA
TATGGATTTGGTTATGATGCATCTTTTGAAGATTATAAGGTTGTGAAGATCTTTAGTTTT
CCTCATATTGAGGGAAGATATGAGAATATGGTTAATGTTTATAGCTTAAAAGCTAAATCT
TGGAAAATGATTGAGGGATTCAATAGTGGTAGTTTAAATGGAAAGGTTGGTGTGTTTGTA
AATGGGGCACTTCATTGGGAAGCGTCCCATAGTCATTGTTCGGGTTCGTTTTGGGAGATT
GTTACTTTGGACCTTGCTGTAGAGAGATATGGGAAAATAGCACTGCCTAGTTATGAAGAT
GGAGGTGTTTATTGGACATTAGGTGTTTCGAGGGGGTATTTAGTCGGTTGTTGCAACTAC
GAAAAGAATAAGGCGGATGTGTGGGTGATGAAGGAGTATGGTGTTGAGGAATCTTGGACT
AAATTGGTAACCATCTCGTTACCCGTTGATCGTAGGGCTTATATCTTACCATTGTTCGTG
GCTGAGAATTGTGATGAATTTCTGCTGCAGCTTGGGAAGAGCTAGCACTGTATAATTCAA
GGGATGGTTCATACAAGCGACTTGACGTTTACTCATCTGCTGATTATTTTCGTCAAGCTC
AAGCTACGACCTACTTTGAGAGCCTTGCTTCACCTCATATGAAGTGATGTGATGACAGGT
GACACTGTGGAGGCAGAGAAATTAAAAGAGGGTAAAAATCTTTCTGATTGTCTTGTATCC
ATGTTCTCATATTTAGTGATCACATTGTGTCTTTGTCATTGTGTTCTTTTGCGTTTTTCC
TTATCATGTAAGATTCGTGGTACTTCAGCAACATTGAAATATTATTG
