Microarray Probes on PGSC0003DMT400055822
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_48458_PI426222305 |
JHI_St_60k_v1 |
AGTAATATGAAGTAGGGGTGTACATGACCGGGTTGGTTCGGGTTTTTCAAATATCAAACC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400055822
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400055822 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G20770.1 |
+1 |
9e-174 |
509 |
249/346 (72%) |
GCR2-like 2 | chr2:8945380-8947041 FORWARD LENGTH=405 |
Transcript Sequence (2318 bp)
>PGSC0003DMT400055822 2318 pgsc_dm_v3.4
GTCTGGTGCTGTTGCTAACAGATAGTGGTGGAGACATGGGGACTAACAAGGCAACAGGTT
CCAGATTTTACACTATATTGTGGAACCCTTGGGACTGCTTTTTTGCTCTTCAAGGCCTAT
CAGGTGACGAAGAACTCGAATGACCTTGCTGTTTCCTCTCAGATTGTGAAGGATTGTGAC
TCTGCTTCTCGACACTCAAGGGATGTGACGTTCCTATGTGGGAGAGCTGGGGTTTGTGCA
CTAGGTGCCGTCGTTGCCAAGTACATGGGTGATGATCAATTGGTTTTCTACTATGTATCT
CAATTTAAAGAGATAAAATTAACCAAAGATCTTCCTGATGAATTGCTGTATGGTAGAGCT
GGATACCTCTGGGCCTTTCAATTTATAAATAAGCATATTGGCCAAGGAACAATTCCTTCC
ACCTACACTGCTGCTGTGATCAATGAAATCATCAAGAATGGAAGAAAATTGGGCGGGAAG
GGCAGAAGCCCATTGATGCATGAATGGTATGGTGAGATGTACTGGGGTGCAGCTCATGGA
TTGGCTGGAATTATGCATGTTCTGATGGACTTTGAACTGAAACCCGATGATCTTGAAGAT
GTCAAAGGGACTTTAAAGTACATGGTTAAGAATCGCTTTCCCAGTGGAAATTACCCTGCA
AGTGAAAATGATAGGAGGAGAGATTTACTCGTGCATTGGTGCCATGGAGCTCCAGGGATT
GTGCTAACACTTGTCAAGGCAGCTGAGGTTTTGGGAGACGAAGAATTTCTTAATGCAGCA
GTAGCTGCAGCAGAGGTAGTATGGAACCGTGGTCTTCTTAACCGTGTTGGGATTTGTCAT
GGCATCAGCGGGAATGCTTATGCCTTCTTATCTCTGTATCGGCTCACAGGAAATGTGGAG
TACTTGTATAGAGCCAAAGCTTTTGCCTGCTTCCTTCTTGATAGAGCTCACAAGCTAATA
GCGAAAGGAGAAATGCATGGAGGAGATACCCCATACTCCCTTTTTGAAGGTATTGCGGGT
ATGGCTTATCTTTTCCTAGACATGACAGATCCAAAAAAACGCTCAATTTCCTGCCTATGA
GTGAAAACTTCATCCCGCTCAAAGAGCAGGGCGTAGTAGCACTTCTCTTATGTACGTGTG
TAGCGAACTCTCTTGTGTGATATGCACTTAAATCTCTTCTATTTCATTTGCTTTTATTCC
ATTTGCCTGTTAGACCAGATTCAAAATGATTCAATGAAGTATAACAGGAAATGTTGCTGT
AAAGTCTGTGGAAACATAATGTAGAACCGAGGCATCCAAAACCGTTGCCTCGCTTATTGA
TCAACATACAAGTAGAGATATGGCGAAAATGTGATCAGCATTCAAATTCAAAGAGGGAAA
AGCATTGCTTCGACTCATTTTCGTCAAACGAGCTTGTTGAGGAAGTTGATGATCAACTGA
TTGACCTGTTGAGGAAACTGCTCTTGGACAAAATGGCTTCCTTCTGGTAAGAATGTGATT
TCAAGATTAGGTACATACTCTTTCACCATTCCACTTGAAATAAAGTGCTCTAATCCACCA
AACTTAAGGGCATAATCCTTCTCCCCCATCACAAGCAAAGATGGAACTTTGATTTTGATA
TCTTCAACTCCATATTCTTCTAGCCAAGCCCTGCCAAAAAAAAAAAAAAAACCACCTTAA
TATTTTTTTTATACTACGACAGACACGGTGCTCTAGACTACCATGAAGCCTAATCCTATC
GAAAAGTGAGAAAACATCAAACTACCTACTAATCTTCTATCCTAATCTGACGCTCTAAAT
ATGACCACAACTAGAGTTGAGAAGAAGTGACTGACCTGTAAGGCACCTGCAGTGCAGTCT
GGAAGCCTGAGTTTTCATAAAGAGATGCATAGTTTGCAAGATCTTCTTCAGTAAACCAGG
CAGGTAATGGTGTAGAAGGATCAACCAAGTCCATAATTTCTTCATCATCCTTTGCTGCTG
GCAATTCACTTCCAGAGAATAATATATAAATGTTTTTAACTACTGTTTTTGTATCAAAAC
GCCCAAAGTCCGCTTCAGCTCGCCCTGGTTCCTGCAAAACATAGGCGAGGTGAAGCCAGA
TTTCAACTTTATGGATTTTGGACTTTAGCATAACGACTAATAAAATGTGCAAGTGTTAGA
CAGAGCTAGTAATATGAAGTAGGGGTGTACATGACCGGGTTGGTTCGGGTTTTTCAAATA
TCAAACCAAATTATTTATATAAAAATTTTAAATTTATAAACCAAACCAAACTAATAAAAT
TCGGATTTTTTTGGGTTTTTCAACCTCGGGTTGGTTCG
