Microarray Probes on PGSC0003DMT400055809
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_48430_PI426222305 |
JHI_St_60k_v1 |
TGAAGATGAGCCTGTTCCCTTATCTCAAGTCAAGATAGGACAAGAGTATGAAATTGTCCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400055809
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400055809 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G03400.1 |
+2 |
0.0 |
823 |
398/590 (67%) |
Auxin-responsive GH3 family protein | chr4:1497675-1499729 REVERSE LENGTH=591 |
Transcript Sequence (1936 bp)
>PGSC0003DMT400055809 1936 pgsc_dm_v3.4
GAAAATGGAACCATCAGTAGATAAGTCCAATTATTGCACTGACACTGATGAGATGATCAA
TTGGTTCGAGAAATCCGCCGAAAATGCTGTCGCTGTACAGCGGCAGACGCTTCGGCGGAT
TCTTGAACTCAACCATGGTGTTGAATACCTAAAAAAATGGCTTGGAGATATTAGACTTCA
AGATGAAAATGCTATGGAATCACTTTATGCTACTATGGTTCCTCTTGCTTCTCATGCAGA
TTTTGAGCCTTATATACATAGAATTGCTGATGGTGAAAAAGCTCCTTTACTTACTCAAGA
CCCTATGAAAACTTTATCCTTAAGTTCTGGAACCACAGAGGGAAGACAGAAATTTGTACC
ATTTACTCGCCATAGTTCCCAAACAACTCTTCAAATTTTCAAATTGGCAGCAGCTTATAG
ATCAAGGATTTATTCAATAAGAGAAGGTGGAAAAGTTCTTGAATTTATATATAGCAGCAA
ACAATACAAAACAAAAGGGGGATTAATAGCAGGAACAGCCACAACACATTATTATGCTAG
TGAAGAATTCAAGATTAAACAACAACACACAAAATCTTTTACTTGTAGCCCTGAGGAAGT
TATTTCAAGTGGAGATTATAAACAATCAACATATTGTCATCTCCTTCTTGGCTTATATTA
TTGTGATGAAATTGAATTTGTGACATCAACTTTTGCATATAGTATAGTTCAAGCATTCAG
ATCATTTGAAGAGTTGTGGAAGGAATTGTGCCATGATATAAGAGAAGGTACTCTTAGTTC
AAGAATCAACATAACCAAAGTACAAAAAGTCGTCTTAGATATCATTGTCCCTAATCCAGA
GCTGGCATCAAGAATTGAATCAATATGTGAAGAAGTAGAAAGGGAAGATTGGTTTAGTAT
AATCCCAAAATTATGGCCAAATGTTAAATATGTTTACACAATAATGACAGGCTCAATGCA
ACCATACTTAAACAAATTGAGACATTATGGTGGGAATTTGCCTTTGGTTAGTGCTGATTA
TGGGTCCACAGAGAGTTGGATTGGAGTGAATGTGGAACCTTCATCTCCACCAGAGAAAGT
AACTTTTGCAATTATACCCACTTTTTCTTACTTTGAATTCATACCACTACATAGAAGTAA
GTCACAAAGTTACAATAATAGCCACCAAGATGCTAATCTTCTAGCAAATGATGATTTTAT
TGAAGATGAGCCTGTTCCCTTATCTCAAGTCAAGATAGGACAAGAGTATGAAATTGTCCT
CACTACTTTCACAGGTCTTTATCGATATAGACTAGGGGATGTAGTAGAAGTTGCCGGTTT
TCACAAGAAGACCCCCAAACTCAACTTTATATGCAGGAGAAAGCTGATATTAACAGTAAA
TATCGATAAGAATACTGAACAAGACCTCCAGTTAGTGGTGGGGAGAGGTTCTCGAATACT
AATAAGCAAGTCAAGAGCTGAGCTAGTAGACTTCACAAGCCATGCAAATGTATCAAAAAA
ACCAGGCCATTATGTGATCTATTGGGAAATCAAAGGAGATGTTGATGAAAATGTTCTTGG
AGAGTGTTGTACGGAAATGGATGCTTCTTTTGTTGATCATGGATATGTTGTATCAAGAAA
AACCAATTCAATTGGACCATTGGAACTTTGCATTGTGGAAAGAGGTACTTTTAAGAAGAT
TTTGGAACATTTTATTGGAAATGGAGCAGCATTGAGCCAATTTAAGACTCCTAGATGCAC
TAGTAACCAAAACCTATTAAGAATCCTTAATGTATGTACCATTAAAAGGTTTTATAGCAC
AGCCTATATGGGTGATAGAATGTTTGTAACATAATTGAATTTGCATTGATACCTACTTTA
CTTGTCGTTTTTATTAAAAATAAATTATTCAAAACAATTGTCTTATTAAAGAAATCAAGA
TATATCTAATTGAGTA
