Microarray Probes on PGSC0003DMT400055694
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_45767_PI426222305 |
JHI_St_60k_v1 |
ACTATTTCTTCTTCTAAGTTGTTGGCGAAAAGTCTGAAGAGGGCTCATGACTCGACTTAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400055694
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400055694 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G16740.1 |
+1 |
9e-107 |
323 |
196/316 (62%) |
Transmembrane amino acid transporter family protein | chr5:5501044-5502856 REVERSE LENGTH=426 |
Transcript Sequence (1110 bp)
>PGSC0003DMT400055694 1110 pgsc_dm_v3.4
ATGTCTTCAATAATTCTTATAGGACTTGGAATAATATGTGCTTATACTTCCCATCTACTT
GGAAAATGTCTACAAAAGAATCCCAAATCAAAAGACTATAAAGATATTGGACACCAAGCA
TTTGGAACAAAAGGGAGAATCATAGTCACATCTTTTATATACTTAGAAATTTTCATGGCC
CTTATTTCTTACACAATTTCTCTACATGACAACTTGTCCATTGTGTTCATAAACACAAAT
TTTAAATTAAAAGGGATTTTATTTCACTTATCTACTTCACAAATATTAACAACAATTGCT
ATTCTTATAGCTATTCCTAGCCTTTGGTTAAGAAATTTTTCTTCTATTTCTTTTCTTTCA
AGTGGGGGAATTTTTATGTCACTTTTAATATTTGTTACTGTGGCATGTACTGCTATTTTT
GGTGGTATAAAAGCTAATCATCAAATACCATTTCTTCATTTACAAAATATTCCTTCAATA
TCTGGACTTTATATTTTCAGCTATGCTGGACATATTGTTTTTCCTAATATCTACACAGCA
ATGAAAGACCCTTCAAAATTCACCAAGGTATCAATAGTGAGCTTTTCATTAGTGACAACG
CTATATATATCCTTAGGTTTTATGGGAGCAAAACTCTTTGGTCCACAAGTGAGTTCACAA
ATAACTCTAAGTATGCCCCATGACCAAATCATCACAAAATTTGCATTATGGGCAACAATA
CTCACACCAATGACAAAATATGCACTGGAATTTGCACCAATTGCTATTGAGTTAGAAGAA
AATTTGCCATCTTCAATGAAATCTAAAGTCAAGATGATGATAAGAGGAATTGTTGGATCA
ATTTTGTTACTAGTAATCTTGATTTTGGCCCTTAGTGTGCCATATTTTGAACATGTTCTT
AGTCTCACTGGCTCATTAGTTGGTGTTGGGATATGTGTCATTTTCCCTTGTGCTTTTTAC
ACTAAGATTTTTTGGGGAGAAATTTCGAGGATGAGTTTGATTCTTAACGTTGTTCTCATC
GTTATTGGTGGGCTTTTAGGAGTTGTTGGAACTATTTCTTCTTCTAAGTTGTTGGCGAAA
AGTCTGAAGAGGGCTCATGACTCGACTTAG
