Microarray Probes on PGSC0003DMT400055051
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18233_PI426222305 |
JHI_St_60k_v1 |
GAATTCATTGAGTCATTGACACATGTCATGCAACATGGGAGCTATGAGTCTAGGGCTTAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400055051
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400055051 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G35930.1 |
+3 |
1e-159 |
461 |
231/414 (56%) |
plant U-box 23 | chr2:15083101-15084336 REVERSE LENGTH=411 |
Transcript Sequence (1278 bp)
>PGSC0003DMT400055051 1278 pgsc_dm_v3.4
AAATGGAAGAAATTCAAATACCTCCTTATTTTATTTGTCCAATTTCACTAGAGATGATGA
AAGACCCTGTCACGATCTCCACGGGAATAACATATGATCGAGAAAACATCGAAAAATGGA
TATTCTCTGCCAAGAACAACACATGTCCAGTTACAAAACAATCTCTTATTACGGGCATAG
AGTTGACCCCAAATGTCACTCTTCGGAGATTTATCCAATCGTGGTGTACTATCAACGCGT
CTCATGGTATTGAAAGGTTCCCTACACCAAAGCCTCCGGTTAGCAAACCACAAATAATAA
AGCTCCTAAAAGAAGCGAAATCGCCTATGATGCAAATGAAATCACTCAAGACCCTCCGAT
CCATTGCTTCTGAGAATGATGCTAACAAACGTTGCATGGAATCCGCGGGGGCAATGGAGT
TTTTAGCTTCTATTATTAATAATAATAATTCGAATGAAGTGTTTGAAGAAGAAGAAGAGG
GTTTCATGAGTACTAAAGACGAAGCGCTTAGCATCCTCTATCAACTCAAATTATCCGAAC
AAGGATTGAAGTCACTCATCATGAGTGGAAATGGAGAATTCATTGAGTCATTGACACATG
TCATGCAACATGGGAGCTATGAGTCTAGGGCTTACGCGGTTATGCTAATGAAAGACATGT
TTGAAGTATCCACACCAACTTTACTTTTGAGTTTGAAACAAGAATTCTTCACACAAGTTG
TTCAAGTCTTGAGGGATGAGATCTCTCAAAAGGCTACAAAAGCATCATTGCAAGTGCTAG
TGCACGCGTGTCCATTTGGTAGGAACAGAGTGAAAGCAGCAGAAGCAGGAGCAATTAGGG
TTTTGGTTGATCTTCTGCTCGATTCATCTGAGAAAAGGGTTTGTGAATTGATGCTAATTT
TACTAGATCAACTTTGTCTGAGCGCAGAAGGGAGAGCTGAGCTATTGAATCATCCTGGAG
GATTAGCCATTGTGTCCAAGAAAATACTTAGGGTTTCAAAAGTAGGGAGTGAAAGGGCAA
TCAAGATCTTACATTCAATCTCAAAGTTTTCATCAACACCAAGTGTTGTTCAAGAGATGT
TGAGTTTGGGTGTGGTGGCAAAGCTTTGTTTGGTGCTTCAAGTTGATTGTGGAAGTAAAT
CTAAGGAAAGAGCTAGAGAAATTCTCAAATTTCATGCTAAGGCATGGAGTAATTCTCCTT
GTATACCTAATAATTTACTATCTTCATATCCATTTTAGGAATTAGGTAGAAATGAGCAAA
AATTGCTTAGTAGTGGAT
