Microarray Probes on PGSC0003DMT400054998
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18373_PI426222305 |
JHI_St_60k_v1 |
GTCTGCTTCAATCTACAACAAGTTCGGGTCGACTATATGAATCCTCACTATATTTTCTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400054998
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400054998 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G06530.2 |
+1 |
3e-74 |
184 |
86/103 (83%) |
ABC-2 type transporter family protein | chr5:1990060-1994605 REVERSE LENGTH=751 |
Transcript Sequence (1943 bp)
>PGSC0003DMT400054998 1943 pgsc_dm_v3.4
TGTGAAATCTTTGGCAGGATTGGATTTGTGACTCAAGATGACATACTATTTCCTCACTTG
ACAGTGAGAGAAACTTTAACGTATGCAGCACGCCTACGACTACCAAAGAAACTGACGAAG
GAGGAGAAACAAAAACGAGCCATCGATGTGATATACGAGCTAGGACTAGAGAGGTAAGTT
ATTGTTTCTATACTTGACAAATTTGTGAAATAATCTTCGTGTGACCAGAGGCAGAATGAT
AAATTTTGAGTTTATGACTTCTGAATTCTAAGAAAAAGGTAGATTACTGGATTCAGGATA
AGTTATTTATACATATTAAGTAAATTTCCTATCATGCATTTCATTTTGTGAAAGCTGAAT
GAGGAATGTGATGTTTTATCAGATGCCAAGACACAATGATTGGTGGCTCCTTCGTTCGTG
GAGTATCAGGAGGAGAAAGAAAACGCGTCTGTATTGGAAATGAGATCATAATCAACCCCT
CCTTATTGTTCCTCGATGAACCTACATCCGGTTTGGATTCAACAACAGCTTTAAGGACAG
TTGAGATATTACACGATATCGCTGAGGTAAGACTTTCTCTCTGTTTTATCTAAGATTTCG
TCATGGCACGAGTCATATGTCCTTACAATTCTGTGGTTATAGGCTGGAAAGACAGTGATC
ACAACGATCCATCAACCGTCTAGTAGACTATTCCACAAGTTTGATAAGTTGATTCTTCTT
GGCAAAGGGAGTTTGCTTTATTTTGGGAAGGCATCTGAGGCAATGGACTATTTTTCAACT
ATAGGATGTACACCTTTGATACCAATGAATCCAGCAGAATTCCTGCTGGATCTCGCGAAT
GGAAACTTAAACGATGTTTCCGTTCCATCAGAGTTGGAGGACAAAGTACAGATTGGGAAT
TCAGATACTGAAACAAGGAATGGAAAGCCATCACCAGCAATTGTGCATGAGGTGAATAAA
TTCTACTACTCTCTCCGTTTTAATTTGTTTATCTTACTTTCCGTTTCAAAAAGAATGTAT
ATATGTCTCTTTCCATTTTTTTGGCAACTCTTTAATTCTAACTTTCCACACGTCATGTTT
AAGACTACAACATGAAAGGACATTTTGGTACATTCGACGAGTGCGTGTCGGATCCTCCAA
AAGTAGTGCATTTTGGATGATCAGATACGAGTGAAGCATCATTTTTGAAGAATCCGAGCA
ACATACTTTTTTCATTCTCAAGGACATAAGTTCTTTGATCATTTCTGAGAAAAAAACTCA
ACCTATCACTTAGCATACATTTAAAAAAAAATTCTGCTCCTTTTCAACTTTCTGAGTTTT
TCGGCCTTATTTGCTCGAACTCTTCAAAAATGTTGGATGGATGCATGTCGTATCCTTGAA
AAATAGTGTATTGTTGGAGGATCCGACACAAGTGCAACAACATTTTTGGAGAGTCGTTTA
CATATAAAAATGCAGTCAAGCAGATAGATCACCTCTATGTCTTGGAACACTTACACAACT
AGTCATAGAAAGAGCTCAACTATTTTCCAAAACAATATATCAACAACAAGTCTGCTTCAA
TCTACAACAAGTTCGGGTCGACTATATGAATCCTCACTATATTTTCTTTTTGATTTTTAA
CAGTATCTAGTGGAAGCATACGAAACGCGAGTTGCTGAGAGCGAAAAAAAGAAACTTATG
GCTCCCATGATGATTGATGAGGAATTGAAGTCTAAAGTAGTTACCTCAAAGAGAGAATGG
GGAGCAAGCTGGTGGACACAATACTCCATATTGTTCTGGAGAGGACTTAAAGAACGACGC
CACGATTATTTTAGCTGGTTGAGAATCACTCAAGTTGTTGCAACTGCAGTTATCTTAGGC
ATGCTCTGGTGGCAATCTGGTGGTGGTAGTCCTAAACATATGCAAGAACAGGTATTTGAC
ATATATACATAGTATAATTTTCC
