Microarray Probes on PGSC0003DMT400054848
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38125_PI426222305 |
JHI_St_60k_v1 |
GTCTCGTTACGAGTTCGAGCAGTGAAAACAATTATCAATGTCTATATTAAGGTAGACTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400054848
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400054848 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G30040.1 |
+1 |
4e-133 |
390 |
194/335 (58%) |
gibberellin 2-oxidase | chr1:10537769-10539570 FORWARD LENGTH=341 |
Transcript Sequence (1249 bp)
>PGSC0003DMT400054848 1249 pgsc_dm_v3.4
ATTTCTTTACTACCTCACCCCCCACCCCCACACACAAAAAAAAATAACTTTTCAAGAACC
AAATCTCTTTAATTTCCACAAAATTTCACCATGGTGGTCTTGTCTAGGCAAGTAGTTAAT
GAACAATTAATCAAGAATTACAAATCCCCTTCATCATTTTTCCCTTGTAATATTCCACTA
ATTGATATTTCAAAACCAGAAAACAAGAATCAACTTGTTAAAGCTTGTGAAGAATTTGGT
TTCTTTAAAGTTGTCAATCATGGTGTCCCTATGGAATTTATTACAAAACTTGAATTAGAA
GCAATAAAATTCTTTTCATCTCCTATGTCTCAAAAAGAAAAAACAGGACCCCCTGACCCT
TTTGGTTATGGGAATAAGAAAATTGGACCTAATGGTGATGTTGGTTGGGTTGAATACATT
CTTTTGTCAACAAATTCTGAGTTCAATTACCAAAAATTTGCATCTATTTTGGGTGTCAAT
CCAAAAGATATAAGAGATGCTGTGAATGATTATGTATTAGCAATGAAGAAAATGGCTTGT
GAGATTCTTGAAATGTTAGCAGAGGGATTAAAAATTCATCCAAAGAATGTATTTAGTAAG
CTTTTAATGGATGAAAAAAGTGACTCACTTTTTAGGCTAAATCATTACCCTCCATGTCCT
GATGAACTTCAAGAATATAATGGAAGAAATTTAATTGGATTTGGTGAACATACTGATCCA
CAAATTATTTCTTTATTAAGATCCAATAACACTTCTGGACTTCAAATTTCACTTGTTGAT
GGCCATTGGATTTCTGTCCCACCTGATCAAAATTCATTCTTCATCAATGTTGGTGATTCA
TTGCAGGTGATGACAAATGGGAGGTTTAAGAGTGTAAAACATAGAGTTTTGGCCAATAGT
GTAAAATCAAGACTCTCAATGATTTATTTTGGAGGGCCACCATTGAGTGAAAAGATAGCA
CCATTGGCATCACTATTAATAAAAGGAGATCAAGACAGCTTGTACAAAGAATTTACATGG
TTTGAGTACAAAAATTCAGCATATAAATCTAGATTGGCTGATAATAGGTTGGTCCTATTT
GAGAAAGTAGTATAGCCTCATCATCATCATCATAATGATTTTTTGATATTTTTTTGTTTA
TGAAGTCTCGTTACGAGTTCGAGCAGTGAAAACAATTATCAATGTCTATATTAAGGTAGA
CTATTTATATCACATCTCTTAAAGTGTGGTTCTTTTTCGAATCTTGCTA
