Microarray Probes on PGSC0003DMT400054830
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38133_PI426222305 |
JHI_St_60k_v1 |
GGCATGAGAAAATAATTGATGATGTATTAGGAATGCCAGCTTGGCATTTATGTGAAACTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400054830
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400054830 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G42900.1 |
+2 |
9e-44 |
154 |
99/272 (36%) |
Plant basic secretory protein (BSP) family protein | chr2:17854599-17855429 FORWARD LENGTH=276 |
Transcript Sequence (1013 bp)
>PGSC0003DMT400054830 1013 pgsc_dm_v3.4
TTCTACATTAATTAATCTTTCATATATTGCATCTTTTTTTTTTTTTGGTTATTTCTCTCC
ATATATGGAAGAAATTAAAAACCAAAATCTCCTTCAACCTCTCATACAAACAACCAACAC
AAACTCTTATGAAAATGACCACAAAATCATCTCTTATTCATCAAATACAAGTATAATTCT
TAGACTTGTTATGGTCATTTTTGTAGGAATAGTCTCCTTATGGGCAAATTATGAAGTTTC
CAAAGGTTTTTCCATAACTATTGTCAATGAAGCCATTGAGGGTACATTTGCAAATAAGCG
TTTCGATCTCTTTTACGTGTCAAACGATGAAGCCACTCGTTTAGTCCTAAGGACTAGTAA
ATTCGTTGAAAATATTCTTTACCCTATCAGTGATCGTCAAGATTCTGGTCAACCAGGAAA
CAAGAAGCAAGTCAAACACGTCATCCTTCAACTATCTAGTCGGAATTTGACTAGTCCGAT
CATTGTTAAGTCGTCTCGAGATGACAAGGATGTGTTTGTTGTATATATAAGTCCTTCAAT
TTTGGAAGGTCCTAATTATAAGCGTGATATGTTTTTGGCGTTGCAAAAAGGTATGGCGCG
TATATGGCTATGGGATGGTCGAGGTAATGCCCCGTCTAGTCTTGTAAATGGCATGACTGA
GTATATTACTAGTTTGGCTAGTTTATCTGGACGTGTTACGTCTGAATCTAAATCAGTCAA
GTCATTAAAATTAAATAGGAGTTGTTGGAAGAGCAAGGATAAAAGGACTATAGTAAAGTT
ATTGAATTATTGTGAGGGGAAAAAAGAAGGATTTGTTAGAAGATTGAACAAAGAGATGAA
AAATGGTTGGCATGAGAAAATAATTGATGATGTATTAGGAATGCCAGCTTGGCATTTATG
TGAAACTTATAATAAAGAGATACTATGAATAAGTTTGTGATCAGAGTAAATAATTCTATG
AACGAATGAATCAGATCAATTGACAAAATGAAGAGATTTGTATAAATAATATA
