Microarray Probes on PGSC0003DMT400053880
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50373_PI426222305 |
JHI_St_60k_v1 |
CGACGCTCTTCTGCAATTGTACATTTCTATGAGCTGCTTGTAAATTTTGTGCTTATATTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400053880
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400053880 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G09780.1 |
+1 |
0.0 |
976 |
485/774 (63%) |
CRINKLY4 related 1 | chr3:3000838-3003165 REVERSE LENGTH=775 |
Transcript Sequence (2713 bp)
>PGSC0003DMT400053880 2713 pgsc_dm_v3.4
GTAAAAATGGCGACAGCCACGTTGTTTCATCATCTCCAGCTGAATCAGTACATCTCTATA
CTCCCAAAAAACAACACTCCAATCTTGATCAAGATTTCATTTTTTCTCATTGCTCCATGA
CTTTACACTTTTCTGCTCAAAATAATGAACACCCTTTTCATCAAGATTACATTTTTCCAT
CTTCTTTGCTTCATCTTCCTCAAATCTGCATCTGGTTTTGGTTCTATGGGACCCATTTCA
GCTGCTTTTGGTAAAAATGGTTTCTTTTGTGCTATTGATGCTAGTGGCAAACAAGATGTT
ATTTGTTGGGGTAATAAAACTAATAATCCTTCACTTCCTGATGTACTAAACTACCCCACT
GATGTTCCCTCCATGGCTGCTTTATCTGGTGGTGATGGTTTTCTTTGTGGCATTTTATCA
AACACTTCACAGGCATTTTGTTTTGACTCAATGGGATCAAGGTCTGATCTTGTTCCTAAT
GTTTATAAACCTAATGCTTATTCTCATATTGCTGCTGGTAGGAATCATGTGTGTGCTATT
AGGGGACCTTATTATTCTGAGAGTGATTGGGGAAGTGTTGATTGCTGGGATATTATTCGA
AAATCCAATGGTACTTTTGTATCGAGGGAGAGTTCATTGTTTTATAATCAGTATACTAGT
TCATATGTTTTTAAGAAGATAGTTTCTGGTGATGGGTTTAGTTGTGGGGGTGTTAAGGAT
GGAGGGATTCTTTGTTGGGGTCCAAATTCTAGTGGCCTTGGTATATCGGGTTTATCGGAG
AATGTTCATGCGTTAACTGCAGGGATTGACTCTGTTTGTGGGGTTTTAGAAGAGTCAAGT
GAGGTCAAATGTTGGGGGTCTAATGTCTCCTTTGGTATCCCTCCGGTTGGGGTACCATTC
GTGTCGTTGGCAGCTGGTGTAGAGCATTTTTGTGGGATTAGACAAGATAATCATGGGATT
ATGTGTTGGGGAAACTATAATTCATCTCTGATTCCTAAAGGATCAGGCTTTCTTGCTATT
GCTTCATCTGATTTTATAACTTGTGGTATTAGGGAAGGCGATTTGGTTCTTGATTGCTGG
TATACAAATATTTCATCAAAAGTAGATTATGATCCACCACTGCAGCTGTGTAGTCCAGGA
TTGTGTACTCCTGGTTCTTGCGGGGAAGGGAAATTTTCGTTCAATGCGAGCCTTATAAAT
GAAGCAGATTTGATAAATTTGTGTGTTAGGAAAGATCTTAAGATTTGTTCACCTTGTGGG
GTGAACTGTTCTGAAGGATTCTTCCCCTCTAGTTCTTGTACTGAAAATGCTGACAGGGTT
TGTACTACTTGCTCTCTCTGCCAGAATACCTCTTGTTCTGATGTTTGTAAGCTCCAAATA
TCGGCAGAGTTGAAGCAACAGCATCAGCATCAAATGCGTCAACTGATCATCATAGTCGGG
TCTTCTGCTTTTGGTTTCTTGTTCTGCTTAGCTGGATTATGTTTGTTAATCCGCATGATA
TCCAGCAAAAGTAAAGAAGGTGGAAAGAACCAATTCGCCTCTTGTATTCGCAAGCCTGAG
AAGGAAACTGATGCTAATACTGACCTTCATCCTCCTGTATCCGTTACTCCGTGCCCAGGG
GAAGCTCAGGTTTTCCGTCTTTCAGAGCTGAAAGACGCCACTAATGGGTTCAAGGAGTTC
AACGAGCTTGGCAGGGGAAGTTACGGATTTGTTTATAAAGCTGTTCTGCCGGATGGGAGG
CAAGTAGCAGTAAAGAGGGCCAATGCTGCTACGATAATACACACCAACAGCCGGGAGTTT
GAAATGGAGCTAGAGATCCTCTGCAGTGTTCGTCACAGCAATATAGTTAATTTATTAGGT
TATTGTGCAGAAATGGGGGAAAGGATTCTTGTTTACGAACTCATGCCTCATGGAACACTT
AATGACCACCTACATGGGGGTCTTTCTCCGGTGAGCTGGAACCTTAGGCTGAAGATCGCA
ATGCAGGCTGCAAAGGGGATCGAGTACCTTCACAAGGAGGTTTCTCCTCCTATCGTGCAC
CGTGATGTGAAGAGTTCAAACATTCTCTTGGATGCTGATTGGGGAGCTCGGATTGCAGAT
TTTGGACTGCTTACTCCTAACGAGAAGGATCTTAATGGAGACGTGCATATGGATGTCTAT
AACTTTGGGATCGTGCTGCTAGAGATTCTTAGTGGAAGAAAAGTTTATGACAGGGATTGC
ACACCTCCGAGTATCGTTGACTGGGCATTGCCTCTGATCAGACAAGGGAAAGCAGCTGTT
ATCATAGATCGTTACGTTGCTCTTCCAAGAAATGTCGAACCTCTGCTTAAACTTGCTGAA
ATCGCAGAGCAGGCATTGCGGGAAAATCCTGCTGAGCGCCCTGATATGTCACAGTTGGCA
CTTCTGTTAGAGCAGCTAGTGAAGGATGTAATGATATCATAGCCTTTATGTCGGAGCTTA
TATTAAGTTTTTGGTGGATTGAAATTTTTCAGAAAACAAAATCAGAGGATAGCATATTGG
TGAGTAACGACGCTCTTCTGCAATTGTACATTTCTATGAGCTGCTTGTAAATTTTGTGCT
TATATTTTTTATTTGCCACATTCTTGGACAAATGTCGACAATAAATTTTCAACTTTTTCT
TATAGCAATGAAACATGTGATGCTGCACCAAGTTATCTTTCATTTAATATCAATGTAATG
AAGTGTTTTTCCA
