Microarray Probes on PGSC0003DMT400053661
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37763_PI426222305 |
JHI_St_60k_v1 |
GCCACTCTATTCAGTTGGCCACAGTAAAAGTCTCCATAGCTCCACAAATTTAACTGCTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400053661
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400053661 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G43540.1 |
+2 |
5e-112 |
285 |
148/243 (61%) |
Protein of unknown function (DUF1350) | chr3:15430770-15433035 FORWARD LENGTH=373 |
Transcript Sequence (1652 bp)
>PGSC0003DMT400053661 1652 pgsc_dm_v3.4
TAAAAGTCTCCATAGCTCCACAAATTTAACTGCTAAAAGAATTCTCCATTTTCCCTCACT
GCTTCACTCTCACAGTAGAAAAATGGCTTCTACTTCTGTATCTTACATGGCTACTACTAC
TCTCACTTCCAATCTTCTTGAAATCAAACAAAACCCCTTTCTTCCAAATACTTTTCCATA
TTTATTCCGCCCCTTTTCTCCCAGAAATCTCAAGAACCCAAAGTTCTTCAAGTTTCCTAA
AATGACACTCTCAAATGACTATATGGGTATGGGTAGTTTCAACTCCACAAGAATCAATTA
CAATACTACCACTACTGGTAAGTTTTACAAAAGGATGGATTCTTGTTTGGTTATTCCTCC
ACCAAAGGGTATAAAACCCAAAGCTATTATCAAATTTGTGGGTGGTGCTTTTATTGGAGC
TGTTCCTGAAGTTACTTACAGTTATTTACTGGAGAATTTGGCGAGAGAAGGGTATCTGAT
AATTTGTGTGCCTTATAATGTGACATTTGATCATGCCCAAGTCACAAGACAGGTTTTTGA
GAGATTTCATGCTTGTTTTGATTCAATTTTAGCATCAGGGTTACCTGATTCTGGTTTTTC
TGCTGCTGAGATTGTTGATTTGCCACTCTATTCAGTTGGCCACAGTAATGGTGCACTTAT
TCAAGCGCTCGTAGGAAGTTATTTTTGTGAGAAGATACCTAAGGCTAATGTTATAATATC
ATACAACAATAGGCCAGCATCAGAGGCAGTGCCATATTTTGAGCAGTTAGGTCTTCTTGT
TGGCCAGATGGTGCCTGTTATATCTCCAGCGTATTCAATGGCTCAATCGGCTTCAGGAGA
TGCATTGAGGGTGTTGCTTGATACAGCTGGAACAATCATCCCCGACTATGATCCAGAAAC
AGTTGTTTCATTGACTAAATTTGCTGATCAGCTGCCTTCGGTATTTGGCGAGCTTGCTCA
AGGGATATCAGAGTTCAAGCCAACACCTTCAGAAAATCTGGGTGTTTCAATAACGCCTAT
AATGTCAAGCGTACACTGCTGGTGAAATTTGACAATGACGCAATTGATGAGACAGATGGG
ATTGAAGAGACACTAAAGCCTCGTGTAGAATCTTTTGGTGGAAAAGTGGAGAAAATTGCA
TTAACCGGGAACCACATCACACCATGTGTACAGGAACCGAAATGGCGAGTAGGAACTGTA
TACACTCCAGCAGATGCTATTGCTCAAGTGGTTAAGACTCTTTCAATAAATGACACAAAG
GGCCTATGTACAACCATTGCCAACTGGTTCAGTTGTCTGGAGGAGTAATCTTTTGTCACT
TCAGCTGAAATCCTATATCGTTTTGGAATGTCATTACCTGCACAAACATGGAAGTCTCTC
ATGCACAATGTATAGCCCAACGACGAAGAAAACTGCACATATATATATCATCACAGTAGC
ATCAATAGTACAGTTAAATGTCTCCTTGCCCTCTGGAAACGAAAGAAGAAATGTGATGCG
TATACAACATTGCAAAAGTTTACAATTAGTTTAAGGATAATTAACCTTAATTGAGATTAC
AAGTAGAGAGAGATAGTATATGTCTTGGTGAATCTTGCTGTTGTTTCTCACTTGTTCAAC
AAAAGTAGACCTAACAAACAGGTCTTTTTTTT
