Microarray Probes on PGSC0003DMT400053648
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37752_PI426222305 |
JHI_St_60k_v1 |
CTTTTCAGTATCAAGAATCTGTAGATATATAAATGCAGCTCTTTCTCAATGACACCCCAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400053648
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400053648 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G31650.1 |
+3 |
4e-166 |
381 |
212/344 (62%) |
RHO guanyl-nucleotide exchange factor 14 | chr1:11326474-11329767 REVERSE LENGTH=576 |
Transcript Sequence (2402 bp)
>PGSC0003DMT400053648 2402 pgsc_dm_v3.4
CTCCCACCTCACTTGTCACACACTATCTCCTCCTTTCCTCCCCCAAACTTGTCTTCTCTG
CATTCTTTTTCTTTTTCCACCACTGCTTTCATACCTTCATTTTCCACCTCTTTCACACTT
CTCACCAGAAAGAAAAAAAAGACCAATCTTTACTTTTCAGTATCAAGAATCTGTAGATAT
ATAAATGCAGCTCTTTCTCAATGACACCCCATTTTTTTTTCCTTCAGAGAGGATAGATGA
ATGAATTCTATCTTCATTTGATCATATAAAGGTGTTTGTTGAACAGCATCTTTTTGAGAT
AATTTCCAGTTATCTGAAGTACATTTTGGTCTAAAGGGAAATCAAGATTGCTAAAGATGG
TAATCATGAGGAGTAGACTTGCCTGCTGTACAAGAGATAGAGAGATCAGCATTGACTTTG
ATGAAAATCAGAGAATTACAACATATGATGGCCTTGAAAGTATTTTGAACAGTCGGCCGT
ATGACAATCAAAGTGTCACTAGCAGAGGTGATGGAGGTGTTACAGATTCCTTGGATGATG
ATGACTCAAGCAGCAGTTCTAGCAATAATGTTTTTGGATCTTTCTCGTCTCACTGGACAA
CAATGAAGAGGGATGATCAGGGATCTGAGGAGTGGGATTTCTCAGCAAGCCCAAAACATT
ACTATGTAAAAGAAAAACCGGCTTATACAACCCAGTTTTCCGATTTGGAAACAATGAAAG
AAAAATTTGCAAAGTTGTTGCTGGGGGAGGATGTGACTGGAGGAAGCAAGGGGGTTTCCA
CTGCATTAGCACTGTCAAATGCCATTACAAATCTTGCAGCATCAGTGTTTGGGGAACTTT
GGAAATTGGAGCCACTTGCAGAGGATGGGAGGAGGAAATGGAAGAGAGAAATGGAGTGGT
TGCTCTCTCCTACGAACCATATGATTGAGTTGGTTCCTGCTAAACAAACTGGTTCTAATG
GCCAGAAATTGGAGATCATGGTTCCAAAAGCTCGTGCAGACATCCATATGAATCTTCCAG
CACTTCAGAAGTTGGACTCCATGCTTCTTGAAGCTCTGGATTCAATGGTTAATACTGAGT
TTTGGTATACGGAAGTGGGTAGCCGAGCAGAAGGAAGAAGTAGAAGTGCTGGGGAGAGCA
AAAGGTGGTGGCTTCCGTCACCCCAGGTACCCATAGCTGGGCTCTCTGATCCTGAAAGAA
ACAAATTGTTGAATCAGGGTAAGTTGGTGAATCAAATATACAAGGCAGCTAAAGCTATCA
ACGAAAATGTTTTGTCTGAAATGCCTGTTCCAACAATCATTAAAGAAGCACTTCCAAAGG
CAAGTGAGCTATGTCACTGAAGCTATTTTGTAGTTGCTACAATGTATTTCTTTGTTCATA
TGAACCGAGTAACAAAATCCATTCACTCTAACAGTCTGGCAGGACAAGTCTTGGAGAGGA
CCTTTATAGGATCCTGAATGCGGAATCAACATCTGTGGAGGATATGCTCAATTTCCTTAA
TGTAAGATCTGAACACAATGCCCTTGAAGCTGTTAACAGGTTGGAGGCTGCAATACTTGC
ATGGAAAGAGAAAGTAGCTGACCATGTCTGTGGAAAATCTCCAGCTCGAACATCTTGGTC
TTTCAAAAAAGATCCAATATCTGAACTGGACAAGATTGAGGTGTTATCAAGCAGAGCAGA
AGCTCTTCTGCAGCAACTCATGAATAAATACCCAAACCTTCCTCGGACATTCCTCAATGT
CACAAAGATCCAGTATGGCAAGGATATCGGGTGTTCAATTCTTGAAGCATACTCTCGTGT
TCTGTTGAACTTGGCATTCAGCATCCTGACTAGGATAGGAGAGATTCTGCAAGAAGACAT
TTTGAGCAATCCCAATTCTCCCGCGGCTTCATGCCACCTTCCTGGCATAAGAATTGCAGG
ATTGACAGATAGTCCCATGGCTAGTCGTGTGAGGCACTCGTTGATTGATCAGATGAATAA
AACAGATGGACGTTGTTGTGATTCTCGTCGTACCAATGCTTCTGATATAGACATTGAGTT
TGCTGAATCAAGGTTAAGTTCAGTAACTGCAACGCCAAGCCGAAGAGTGTGGTGCATAGG
CAGAGAAGCTTGTAGCAGCATGTCTGCTGCAAACTCACCTTGATAAGCAAAGTTTTATTT
TATTAGTCTTTATGTAGATATCTATATAATATCATTTCCATGTCAAAACAACAGCCTTAT
AGCTTGAGGCTGAGTTTTCATGGGTTATCATTGGAAACTTGCCCTCATTTACAATATACA
AATCGAGTTGAGCATTATCAAGCTCCCGTTTGATTATAGATTTTGAAGTTGAAACTTGAA
AATGTGAGTTTTTGAAGTTGTGATTCTTTAAACTTGAAGTTATGTTTCGACATGCATTTT
AC
