Microarray Probes on PGSC0003DMT400053647
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37720_PI426222305 |
JHI_St_60k_v1 |
TTCCACTGCATTAGCACTGTCAAATGCCATTACAAATCTTGCAGATGGTAATCATGAGGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400053647
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400053647 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G31650.1 |
+1 |
4e-175 |
509 |
301/577 (52%) |
RHO guanyl-nucleotide exchange factor 14 | chr1:11326474-11329767 REVERSE LENGTH=576 |
Transcript Sequence (1539 bp)
>PGSC0003DMT400053647 1539 pgsc_dm_v3.4
ATGGTAATCATGAGGAGTAGACTTGCCTGCTGTACAAGAGATAGAGAGATCAGCATTGAC
TTTGATGAAAATCAGAGAATTACAACATATGATGGCCTTGAAAGTATTTTGAACAGTCGG
CCGTATGACAATCAAAGTGTCACTAGCAGAGGTGATGGAGGTGTTACAGATTCCTTGGAT
GATGATGACTCAAGCAGCAGTTCTAGCAATAATGTTTTTGGATCTTTCTCGTCTCACTGG
ACAACAATGAAGAGGGATGATCAGGGATCTGAGGAGTGGGATTTCTCAGCAAGCCCAAAA
CATTACTATGTAAAAGAAAAACCGGCTTATACAACCCAGTTTTCCGATTTGGAAACAATG
AAAGAAAAATTTGCAAAGTTGTTGCTGGGGGAGGATGTGACTGGAGGAAGCAAGGGGGTT
TCCACTGCATTAGCACTGTCAAATGCCATTACAAATCTTGCAGCATCAGTGTTTGGGGAA
CTTTGGAAATTGGAGCCACTTGCAGAGGATGGGAGGAGGAAATGGAAGAGAGAAATGGAG
TGGTTGCTCTCTCCTACGAACCATATGATTGAGTTGGTTCCTGCTAAACAAACTGGTTCT
AATGGCCAGAAATTGGAGATCATGGTTCCAAAAGCTCGTGCAGACATCCATATGAATCTT
CCAGCACTTCAGAAGTTGGACTCCATGCTTCTTGAAGCTCTGGATTCAATGGTTAATACT
GAGTTTTGGTATACGGAAGTGGGTAGCCGAGCAGAAGGAAGAAGTAGAAGTGCTGGGGAG
AGCAAAAGGTGGTGGCTTCCGTCACCCCAGTCTGGCAGGACAAGTCTTGGAGAGGACCTT
TATAGGATCCTGAATGCGGAATCAACATCTGTGGAGGATATGCTCAATTTCCTTAATGTA
AGATCTGAACACAATGCCCTTGAAGCTGTTAACAGGTTGGAGGCTGCAATACTTGCATGG
AAAGAGAAAGTAGCTGACCATGTCTGTGGAAAATCTCCAGCTCGAACATCTTGGTCTTTC
AAAAAAGATCCAATATCTGAACTGGACAAGATTGAGGTGTTATCAAGCAGAGCAGAAGCT
CTTCTGCAGCAACTCATGAATAAATACCCAAACCTTCCTCGGACATTCCTCAATGTCACA
AAGATCCAGTATGGCAAGGATATCGGGTGTTCAATTCTTGAAGCATACTCTCGTGTTCTG
TTGAACTTGGCATTCAGCATCCTGACTAGGATAGGAGAGATTCTGCAAGAAGACATTTTG
AGCAATCCCAATTCTCCCGCGGCTTCATGCCACCTTCCTGGCATAAGAATTGCAGGATTG
ACAGATAGTCCCATGGCTAGTCGTGTGAGGCACTCGTTGATTGATCAGATGAATAAAACA
GATGGACGTTGTTGTGATTCTCGTCGTACCAATGCTTCTGATATAGACATTGAGTTTGCT
GAATCAAGGTTAAGTTCAGTAACTGCAACGCCAAGCCGAAGAGTGTGGTGCATAGGCAGA
GAAGCTTGTAGCAGCATGTCTGCTGCAAACTCACCTTGA
