Microarray Probes on PGSC0003DMT400052883
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42387_PI426222305 |
JHI_St_60k_v1 |
ATGGTATTTTTCGATGTCACGTCATTAAAGAATGACCGCGATATATCACTTTTCGGCTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400052883
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400052883 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G17970.1 |
+1 |
1e-106 |
331 |
187/315 (59%) |
aluminum-activated, malate transporter 12 | chr4:9975482-9977722 FORWARD LENGTH=560 |
Transcript Sequence (1355 bp)
>PGSC0003DMT400052883 1355 pgsc_dm_v3.4
TCTACACTAGCATAGCTATACTATAAGTCACATAAACTATGTCTTAATTATTTGATCATG
ACTAATTATAGTACCCTTCGGTGTGGCCCAGTGGTTTGGGCTTGAGACTTCCATGTTGGA
GATCTCAAGTTCGAAATCCCTTATCAGCGAAAGCAAGAGGTTTGTCTTCTGGGTCGAGCT
CGTCGCATTAGGATTGCCTAGTGCGGGTTACCTCTTCTATGTAGTTTGCGAGCTATTACA
TAGGAGCGGGGATTTTTACCCTGTGCACACCCAAAGGCTTGTGTTAATGAGTATTTCAGT
GATGAGGAACAACAAAAAACCAAAGAAAATTCTTCAGATTTGGAGGATCCTATTTACAAT
GGTTACAAAACTGTATTGGATTCAAAATCATTTGATGAGACCTTGGCATTATATGCAAGT
TGGGAGCCAAGACATTCAAGACATTGTTATAGGTTTCCATGGCAACAATATGTTAAATTG
GGAAATGTTCTACGCCATTTTGGATATACAATTGTTGCTCTTCATGGTTGTCTTCAAACT
GAAATTCAGACTCCTCGATCGGTTCGAGCAATGTTCAAAGATCCATGCATAAGACTCTCA
GGAGAAGTAGCAAAAGCTCTAAAGGAATTAGGAGATAGCATAAGATATCGTAGACATTGT
TCACCAGAAATTCTATCTGATCATCTTCATGAAGCTTTACATGACCTCAACAAAGCAATA
AAATCCCAACCAAAACTCTTCATTGGTTCAAAAAACAACACAAACAAGCTAACCCTAGCA
ACTGTCGTTTCTAAAGGACAGTCTGGTGCACTAAACTCTCGTAGGGTTTCCTTATCAAGT
GTGAAGACAGACACGTCCGCGTTGCTTGATTGGAAATCCAAATTAAGAGGTGGTAGTAGT
ACTACTCATGAAAATTTAAAATTGAGGCCAACATTGAGTAAGATTGCTATAACAAGTCTT
GAATTTTCAGAGGCATTGCCATTTGCTGCTTTTGCTTCTTTGTTAGTGGAAATTGTGGCA
AGACTTGATCTTGTTATTGAAGAAGTTGAAGAATTGGGAAGAATTGCACATTTCAAAGAG
TATAATGATGATGATGAACATCATGTTGTTGTGGAAATTGATAAAAAAAATTCAAAGCCT
TTACCAAGTCAATTGCCAACTCAGGATTCAGGAGATTAATTAATTGCCATTAAAAAATAT
AATTTTCATGGTTGATCTATTGATTAGTGAAATGTACTAATTATTAAGATATATACTTGT
ATGATTGATGACTTATTTTTCTTATTTGGGTTGAAATGGTATTTTTCGATGTCACGTCAT
TAAAGAATGACCGCGATATATCACTTTTCGGCTTG
