Microarray Probes on PGSC0003DMT400052839
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42396_PI426222305 |
JHI_St_60k_v1 |
GTGGTAAGAGTGCAACATATGTCACGAGTTTAAACTGGACCTTCATAGATTTTTCAATTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400052839
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400052839 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G17090.1 |
+2 |
0.0 |
811 |
388/550 (71%) |
chloroplast beta-amylase | chr4:9605266-9607250 REVERSE LENGTH=548 |
Transcript Sequence (1905 bp)
>PGSC0003DMT400052839 1905 pgsc_dm_v3.4
ATTTTTCAAACTTACAATTTTCAACAAAAACACACACAAAAAAATGGCTTTAACACCTTG
TTCTTCAACTTCTTTTATCAATAAAAAAGAAAGAAAAAATTATAGAACACATGATGATAT
CTCAAGCATGATTTGCTTTGCTAAAATCAATCCACCATCATGCAATCTCAAAGCAAAAAG
TTCCAATCAAGAAGTTCAATTTTTGAATCCCAATATGGAAGAGAAAGAGAAATTCCATAT
GCTCACAAGTGGTACTCATAGCAACAATAGTAGTACAAAAGTGCCTGTTTTTGTGATGTT
ACCACTTGACACTATATCAATTGGAGGTAATATGAACAAGCCAAGAGCTATGAATGCTAG
TTTGATGGCATTAAAAAGTGCTGGAGTTGAAGGGGTAATGGTGGATTGTTGGTGGGGTTT
GGTTGAAAAAGATGGACCTTTGAAGTATAACTGGGAAGGATATGATGAACTTGTCAAGAT
GGTTCAAGCTAATGGATTGAAGCTTCAAGTTGTCATGTCTTTTCATCAGTGTGGTGGTAA
CGTCGGAGATTCCTGCAGCATCCCTCTACCTCCATGGGTACTTGAAGAAATTAGCAAAAA
CCCAGATCTTGTGTATACAGATAGATCAGGCAGGAGAAATCCTGAGTACATTTCTTTAGG
TTGTGATCAATTACCAGTACTTAGAGGAAGAACACCAATTCAAGTCTACACTGATTATAT
GAGAAGCTTTAGAGAAAGATTCAAGAATTACTTAGGAGATGTTATAGTGGAAATACAAGT
GGGAATGGGTCCTTGTGGTGAACTAAGATATCCATCTTATCCAGAAAGCAATGGTACTTG
GAGATTTCCTGGTATTGGTGAATTCCAATGCTATGACAAGTACATGAAGGCTTCACTAGC
AGCATCAGCAGATGCAATGGGAAACGAATCGTGGGGCCGAGGTGGGCCCCACGATTCTGG
TCAGTACAACCAGTTTCCAGAGGAAACTGGTTTTTTCAAAAAGGATGGAACATGGAATAG
TGAATATGGACAATTTTTCCTAGAATGGTATTCAAGAAAGTTATTAGAACATGGAGACAA
TATCCTAGCATCAGCAGAAGGCATATTCAAAGGAACAAGTTGTAAATTATCAGGCAAAGT
AGCTGGAATTCATTGGCATTATAACACAAGATCACATGCAGCAGAGTTAACAGCAGGGTA
CTATAACACAAGGAACAAAGATGGTTATTTACCAATAGCACGTATGTTCGTGAAACGTGG
GGTTGTTTTTAACTTTACTTGTATGGAAATGAGGGATGGAGAGCAGCCACATAGCGCGAA
TTGCTCACCAGAAGGTTTGGTTCGACAAGTGAAAAACGCGACTAGAAATGTTGGAGTAGA
ACTAGCTGGAGAAAACGCGTTAGAGAGGTATGATGGAGGAGGATATGCACAAGTTTTGAG
TACAAGCAGAGCAGACTCTGGAAATGGATTGAGTGCATTTACATATTTGAGATTGAACAA
AAGGTTGTTCGAGCCCGAGAATTGGAGAAATCTCGTTGAGTTTGTGAAGAACATGTCCGA
AGGAGGTAACACGAGGCTTCCAGAATGCGATTCGAGTAGGACAGACTTGTATGTTAGATT
TGTCAAACAGAGTCGTGCTAAGAAAAATGCAGAGGTTGCAGTTGTGTAGAGAGGTTCATT
TGGCCTCGGGGCTTTGGTTCAGTGGTAAGAGTGCAACATATGTCACGAGTTTAAACTGGA
CCTTCATAGATTTTTCAATTATAAAAGAAAATGTATTCATCAATGTAACATGTAAAATAT
ATAGTCACTCCTATATAGTATAGCATATAAAGAGGAGAATAAAAGCTAAAAACTACATTA
TAGTACCTAGTCCATAAAAGTCTGAAAAATATTTGTTATTTCTGC
