Microarray Probes on PGSC0003DMT400052577
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_26030_PI426222305 |
JHI_St_60k_v1 |
CGTAGTTTGGTTAAACCCACTGAGAATAGACATCACAATTTTTATATCTAAAGACCACAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400052577
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400052577 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G20700.1 |
+3 |
8e-17 |
79 |
79/241 (33%) |
Protein of unknown function (DUF581) | chr5:7006178-7007003 REVERSE LENGTH=248 |
Transcript Sequence (1102 bp)
>PGSC0003DMT400052577 1102 pgsc_dm_v3.4
AGAAGTTTCTCTTTTAGATATAATCCAAAAGAGGAGAAAACTGTTCCTTTTCTTCTCTAC
CAATCTTTCTTTCCTTTCAATCTGCAAAAACAAAAACCTCAATTCCATATTCAAGAACAG
AGAGAGACCTATATGCGTCTCTCTTTGTTCTTTTTCGGGAAAAAATGGCTGAAGTGAGGG
GCCGTAAGAAGATATTATCCATCAATCTTTCCGTTTTTGTCCCCACTGATAACATTAATT
CACCTAAATCCACCAAATCTCCTAACAAATTTGAAGACCCTAATGGTGTTGTTGGCCTTG
GTATTGTTGCAGCCATGTCCAATAATCAGAAATGTAATAAACCTCCAATTCTGACTGTTT
CGCCTAGACCAACTTCGACACCGATACCAATTTCAAGTAATAATTTTTATAATAAGATAA
AGAAAAAACCTACTATTGAGGAAATGGAGATGTGTGAGGAGTATACTCGTGTGATTTCTC
ATGTGGGTACCAATTTGGTTAAGAAAATGGAATATTATGATGATCAATTTCTGGGAAATG
GGTATCATAAAACTGCTAATGCTGCTGCCTCTGCTCCTCCTGAGGCTTTTAGGGCGGCGG
ATTTCCTCAATATTTGCTCTTTATGCCATAAGCACCTTGAGGGGTTGGATATTTTCATTT
ACAGAGGAGAGAAGGCATTTTGTAGCTCAGAGTGCCGTTTGAAACAAATCTCAATCGATG
AACATAAAGAGAAGTGTGGTTCTGTAGCCATGAAATCACCCGAGTTCTCTGCCTCCCCTC
GCTCTGGTACAATGCAGTTTTCCGGTGGTGTTGCTGTGGCATAAGTAAGTTGGTGATACA
GGTCTGGGAAGCTAACTCAATGCATAAGAAGATCTTAATATGTTCAATTTTGAGTAATGG
AATGTTGTTCTGCCTGCCAGAGGTTCTGAAGTTTTGTTAGAACCTATTAAGAGGGAGAGT
GTTTCGTAGTTTGGTTAAACCCACTGAGAATAGACATCACAATTTTTATATCTAAAGACC
ACACACATATATTTAAATATATAAGTTTATGCAATTGAAATCTTTTTACATTTTCGATTC
CACTGAACTTGTTGGATGTCTC
