Microarray Probes on PGSC0003DMT400052553
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_26077_PI426222305 |
JHI_St_60k_v1 |
CATCAATTGAGACTCCAAAATGCAGTCAACATTGCTTCAAGATTTTAATGATGGAAACTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400052553
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400052553 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G26590.1 |
+3 |
0.0 |
566 |
287/468 (61%) |
MATE efflux family protein | chr3:9761927-9765259 REVERSE LENGTH=500 |
Transcript Sequence (1760 bp)
>PGSC0003DMT400052553 1760 pgsc_dm_v3.4
GTCACAACTTGTGTATCTGTTTCCTTTAGGCGTTAATGGAGGAAAATAAGGTACCATTTC
TTACTTCAATTACACCTTCAAAGGCTTCATTTGATGCCGACGAAGATGATATTAAAGCGA
TTAATGGTGTGAAAAGCTTCGTAAAGGAATTTCATTACGAATCGAAAAAGTTGTGGTACT
TAGCAGGACCTGCCATTTTCACTTCCCTTTGTCAATACTCATTAGGTGCTGTTACTCAAA
TCTTTGCTGGACATGTTGGAACCATTCAACTTGCTGCTGTTTCTATCCAAATCTCTGTTA
TTGCTGGATTTTCAGAAGGAATACTGTTGGGAATGGGAAGCGCACTAGAGACACTGTGTG
GACAAGCATATGGAGCTAAACAGAAAGATATGCTTGGAATTTATATGCAGAGATCATGGA
TAATACTGCACGCAACTGCGCTAGTTTTAATGTTTTTGAATATATTTGCCACACAAATTC
TAAGATTAATTGGGCAACAAGAGAAAATAGCGGAATGGGCAGGGCAATTTTCGTTATGGA
TGATACCAATGGTTTTTGCTTATGCCTTTGAATTTCCTATCATGAAATTTCTTCAAGCTC
AAAGCAAAATTATGACTATGGCCGTCATAGCTGGAGTTTCATTTGCTATGCACACTTTGT
TAACTTGGCTGTTTATGTTGAAATTGGGTTGGGGTTTGGCCGCTGGCGCAGTGGTTCTAA
ATTGTTCGTGGTGGTTTATGGTGACTGCAAAAATGATGTATATTTTGTGGGGGAATTCAT
GTGGTGAAGCTTGGTCTGGATTTTCATGGGAGGCCTTCAAAAATCTTTGGGGATTTGTTA
GATTATCTCTTGCATCTGGGGTCATGATATGCTTAGAACTTTGGTATTTCATGTCCTTGA
TTCTAGCCGCAGGGTACGTTGAGGATGCAGAAATCGCTGTCGATGCTACTTCCATATGTG
CAAACATAATAGGATGGACATTCATGTTGTGTATTGGATTCAATGCTGCAATAAGTGTAA
GGGTATCAAATGAACTAGGAGCAGGACATCCAAGAAGAGCAAAGTTTTCAGTGTTAGTGG
TGTCAATCACTTCACTTGTAATTGGTGCATTATTGACACTTGTACTCATACTTACACGAA
GCCAATATCCACTTTTGTTCACAAATAATGTGAAAGTACAAAAGATGGTATATGATCTTA
CTCCTGTATTGGGACTTACACTCTTCGTCAACACACTCCAACCTACACTCTCTGGGGTGG
CAATTGGAGCAGGGTGGCAAGAACATGTTGCTTATGTGAACATTATATGTTATTATGTCA
TTGGAATTCCTTTGGGTCTCTTTCTTACCTTTTTCATCAAATGGGGCATGCCGGGCATGT
GGTATGGGATGTTATTAGGAACTACAACTCAAACAACTGTTCTCATTTGGATAACTGCAA
GAACTGATTGGGACAAGGAGGCTTCTCTTGCTGGAGAGAGAATAAAGCAACTAGGAGGAA
GCAAAAGCTTGAATGTCATTGATGGATATGCCATCAATTGAGACTCCAAAATGCAGTCAA
CATTGCTTCAAGATTTTAATGATGGAAACTCATAGAATTACTCCAACTCTTTTTCCACTT
TTCTGTTATTTTATTTCCTTTAATCCTTGATTAGTGTGATTTATCATTTGAGAAAGCTTT
TTTAACCTAGTTTTGGTATGTTCTTTTTTTTTGTCCATGGTCTTAAATATAGTTGCTCAT
TTTTATTTATTCAGTTTGAA
