Microarray Probes on PGSC0003DMT400052413
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42667_PI426222305 |
JHI_St_60k_v1 |
CACCTCCAAAAGATCTTCCAAAATGCTAAAAAGGCTCTTTTGAAAGGAGTTGAATACAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400052413
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400052413 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G38080.1 |
+2 |
0.0 |
858 |
406/543 (75%) |
Laccase/Diphenol oxidase family protein | chr2:15934540-15937352 FORWARD LENGTH=558 |
Transcript Sequence (2051 bp)
>PGSC0003DMT400052413 2051 pgsc_dm_v3.4
ATTACACAACACATCAAGAACTAAAAAACAGAAACCTAATTCACTTTGTCTAAGCACTTA
AATTGCATAGAGAAAGTAAGTGTTTGAAGAAAGTTCAAAAAAAGAGACAAAAATGAACTC
TTGGATTTGCCATTTTATCCTATTGGCATTTTGCCTTTTTCCTCTTGTTGTTGAATGCAG
GGTTAGACATTACAAGTTCAATGTGGTAATGAAAAATACAACTAGACTTTGTTCCTCAAA
GTCCATTGTTACTGTGAATGGAAAATTTCCAGGACCTACAATATATGCTAGGGAAGGAGA
CAATGTACTTATCAAAGTTGTTAATCATGTTAAGTATATTGTCTCTATCCATTGGCATGG
TATTAGACAACTTAGAACAGGATGGGCAGATGGACCAGCATATATTACACAATGTCCAAT
TCAGCCAGGCCAAAATTATGTCTACAACTTTACCATCACAGGTCAAAGGGGTACACTATT
TTGGCATGCTCATATTTTGTGGCTAAGGGCAACTGTTCATGGTGCAATTGTCATTTTGCC
TAAACTTGGTGTGCCTTATCCATTCCCAAAACCAAACCACGAAGCTGTTGTTATCCTAGC
TGAATGGTGGAAATCTGATACTGAAGCTGTGATTAATGAAGCCATAAAATCAGGATTAGC
ACCTAATGTTTCTGATGCTCACACTATCAATGGTCATCCTGGTCCTGTTTCAAATTGTCC
TTCACAAGGTGGATACAAGTTAAATGTTGAACCAGGAAAAACATACATGCTACGAGTAAT
CAATGCTGCACTCAACGAAGAACTCTTCTTCAAAATCGCTGGTCACAAAATGACAGTTGT
TGAAGTCGATGCCACGTACATTAAGCCCTTTCAAACGGACACTATAGTGATCGCCCCTGG
CCAAACGACTAACGTAATTGTCAATGCCAATAAAAATTCAGGCAAATACATGGTTGTTGC
TTCACCATTTATGGATTCACCTATTGCTGTTGACAATGTAACAGCAATTGCAACATTACA
TTACTCTGCCACACTTACAAATAATCCCTCAACTACACTTACTAGTACAAATACACCTCC
AAAAAATGCAACCCCTATAGCTAACAACTTTTTAGACTCTTTAAGAAGTTTAAATTCCAA
AAAATACCCTGCTAAAGTTCCAATAAAAATTGATCATTCATTATTATTTACAGTAAGTTT
AGGTATTAATCCATGTCCAAGTTGTAAACAGGGCAATGGAAGCAGAGTTGTGGCTAGTAT
TAACAATGTAACATTTGTTATGCCAACAATTGCACTATTACAAGCACATTTCTCAGGGAT
TAAAGGAGTTTTCACCGCGGATTTTCCAGGGAACCCTCCATTTGTATACAACTATACTAA
CACAACACCACCCGCGAATATGGGAACAACGAGTGGGACTAAGGTTTATAAGTTGTCGTA
TAACGATACTGTTCAATTAGTCTTGCAGGATACTGGAATTATAGCTCCTGAGAACCATCC
AATACATTTACATGGATTTAATTTCTATCAAGTTGGTAAAGGACTAGGAAATTATAATCC
AAAAGTTGATCCTAAGAATTTTAATCTTGTGGATCCTGTTGAGAGGAATACAGTTGGTGT
TCCTTCTGGAGGATGGGTTGCCATAAGATTCCGCACTGACAATCCAGGAGTTTGGTTTAT
GCATTGCCATCTAGAGATACACACAACATGGGGATTGAAAATGGCATTTCTTGTGGATAA
TGGCAAAGGTCCAAATGAATCACTTTTGCCACCTCCAAAAGATCTTCCAAAATGCTAAAA
AGGCTCTTTTGAAAGGAGTTGAATACAAATTTTCATAAGAAGGAAAAATGTAGGAAAGAA
AAATAGGGAAAATGTTGCTCAATGAGAAACAAAAAAAGAAAGGAGACACAATAAGACATG
GTATTCATTTTGTTAAGTGAAAAAGGAAAACATTTTTTTTCTCAAGCAATTTTTAATAAT
TATGTGAGTATTATTCAATGTATTCTCTGTTTTTTTTTTGTGATTGATGATGAAAGTTTG
AAGAGTTTGTT
