Microarray Probes on PGSC0003DMT400052381
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42657_PI426222305 |
JHI_St_60k_v1 |
GTTGAGAGGAAGGAACTAGAGGCACTTTCTTGATACTAGTTGTTGATTTGTGTAATAATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400052381
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400052381 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G15710.1 |
+1 |
5e-122 |
363 |
167/277 (60%) |
prephenate dehydrogenase family protein | chr1:5404505-5405581 FORWARD LENGTH=358 |
Transcript Sequence (1382 bp)
>PGSC0003DMT400052381 1382 pgsc_dm_v3.4
TTTTCTCTCTTTCTTTCTTTGTGTCTTTAGTCTAAAATTATTTCTTTTATTCTCTCTTAT
TTAGGAAAAAAATAAGAGAAAGAAAAATAAATTTCACATCAAACCATGTTTTCCCTTTCA
TCTATACAATCTAACAATATTCAATCTCAATCATCTTCATCGCTACTCTTCATTCATCAT
AACCAGCACCACCACTATGGTTTTCATCATTCAACTATTTCAACTCGATTTCACCACCGC
CTACTCTCCCCCCTCCGTGCCCAAAATAGTGACTTAACTACGTCCACCAACAATAACAAC
TATATCTCAGTTCCAGGTCTTGATGACAATCTAACCAGACTTGACAAATTTTCAAAATCA
TTGAGTCTTTTGAATATCGAAGAAAATACATCATTAAATCCCCTCTTATGTTCCAATAAC
AAACTCAAAATAGCTATCATAGGCTTTGGCAACTTTGGACAATTCATTGCCAAATCCTTC
ATTAAACAAGGACATATTGTATTAGCTCATTCACGTACTGATTATTCCCTCATAGCACAA
TCCCTTGATGTCCACTTCTTTCAAGATCCCAATGACTTATGTGAACAACATCCTGACATT
ATATTATTTTGCACATCCATTAATTCACTCGAAAAAGTCATTCATTCCCTTCCCATCCAA
AAGCTTAAACGTAACACACTTTTCGTAGACGTATTATCAGTCAAAGAATTCCCAAGAAAC
ATTTTCCTTCAATCACTACCACAAGAATTTGATATTTTGTGTACTCATCCTATGTTTGGT
CCAACAAGTGGTAAAGACAATTGGAAAGGACTACCATTTATGTATGACAAAGTTAGAATT
GGTCAAGAAGAGTCAAGAATTAAAAGAGTCAACAATTTTATCAACATTTTTGTAAAAGAA
GGTTGTAGAATGGTTGAAATGAGTTGTAGTGAACATGACAAGTATGCTGCTGGCTCACAA
TTTATTACACATACTATAGGAAGAATGTTGCAAAAACTTGGGACACAAACAACTCCTATA
AACACAAAAGGATATGAAAGTTTGTTGAATTTGATGGAGAATACAACTAGTGATAGTTTT
GATTTATATTGTGGTTTATTTATGTATAACAATAATTCAATGGAGGTGTTAGAGAGATTA
GATGCAGCATTGGATAGTTTGAAAAGGGAATTATTTGGACAAGTTCTTGAAAAATTGGAG
AAAAGAGTGGAAAAGGGAAGTAGGTTAGCTTTGCCTACTCCTAATTTTAGTAAGAAAATT
GAAAAATTGCAAGTTGAGAGGAAGGAACTAGAGGCACTTTCTTGATACTAGTTGTTGATT
TGTGTAATAATTTTTTTTTTCCAAAAAAACAACAAAAGATTTGTCATTTTGTATAATAAG
AG
