Microarray Probes on PGSC0003DMT400051878
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_25976_PI426222305 |
JHI_St_60k_v1 |
AGACACCCTCTGTTAGTCTCTGTAAAGGTAAGTTAAGTTCATCATCATGCCTATTTGGTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400051878
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400051878 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G22600.1 |
+2 |
3e-30 |
111 |
49/100 (49%) |
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr3:8006711-8007397 REVERSE LENGTH=170 |
Transcript Sequence (618 bp)
>PGSC0003DMT400051878 618 pgsc_dm_v3.4
ATGAAGGTAGGCAAGGTTGGGTCACCCACACATAATTCCATCTCTCTTTTTTCAATTTAT
TGCACTATTTTCCCCTTTATAAACACTTGTCTTGTTATTTCCATCCTACTACTGAATACT
CATCGATCACCACCCAAAAAGTAAGATTTTGAGAAGAAATTAAGTAAGTTCCAAGAAAAT
GAAGATGTTTGCTTGTGCAATTTTTGTGGCTATGGCTATTTTTTCAATACAAGTTAGTGG
TCAATCAGATAATTGTCAACAAGTGATTGTTGGATTAGCACCTTGTTTGGATTATATACA
AGGGAATGCTACAAAACCATCATCAGGATGTTGCACTCAACTAGCCACTATATTGAAAAA
TGAGCCACAATGTTTGTGTCAAATGATTAATGGTGGTGCTTCTTCTTCTTTAGGAATTAA
TGTCAATCAAACACAGGCTATGGCTCTTCCCAAAGCTTGTAATGTTCAGACACCCTCTGT
TAGTCTCTGTAAAGGTAAGTTAAGTTCATCATCATGCCTATTTGGTACCACGAAAGCCAT
TTTTTGACTTGTTTTCTCTGTCAATATGTAAATATTTCAGCTACTACTCCGTCTGGTTCT
CCAGGATCTTCTTCAGGT
