Microarray Probes on PGSC0003DMT400051428
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18984_PI426222305 |
JHI_St_60k_v1 |
TGTAGTTTCAGCTGAGGAAAGTGCAGCAGAGTATGCAGCTAGGAAAAAAGCAGAAGCAGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400051428
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400051428 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G53040.1 |
+1 |
7e-21 |
96 |
87/265 (33%) |
late embryogenesis abundant protein, putative / LEA protein, putative | chr3:19664797-19666405 REVERSE LENGTH=479 |
Transcript Sequence (1803 bp)
>PGSC0003DMT400051428 1803 pgsc_dm_v3.4
GATAGAGTTAATAAAATGGCTAGTCATTTTGAGTCTCTAGCTGATAAAGTTCATGAGGAT
ACAGAAACTTCTCCTGATGTTGTTCATGTCAAGACTACTGTTACTAGTAGTGTTCCTTAT
CAAGAACATCAAACAGAGAAGCAACGATCATCTGATATAATGGATAAAACTCAAGAGAGG
AAGCAACAAGTATTTCAAGAGAAACCAGGCGGTGTTAAATTTGGAGTTCAGGGCCAAGAA
CACGAAGATTCCGACATAAACAGAGGAAAACAGAGCAAAGGTGGTGCTGAAGAGACGAAA
GGTGGTCCATCATTGGAGGAAATTTCTCAGTACAGAGCAACAGCACAGGAGAATTCGATG
AACGCGATAAGGGCTGCTGAAGAGCGGTATGAAAAGGCAAAGGAAATGGGTGGTTCTACA
TTGCAGAATGTTAAAGAATCTGCAACTCATGGACTTGGTGCTACGGGTACTTATGCAGCA
GAAAAGGGTGCACAAGCTAAAGACACCATTACTCAAGGCCTGCAAAAGGGAACTCAATAT
GTTGCTGAAAAAGCTGGAGCTGCTAAAGACGTCGCCCTCGAAAAAGGCCAACAAGCTTAT
GCTGCAACTAAGGATACCCTTTCGGGTGCCGGACAAACTGCAGCTCAATCAGCTCAACAA
GCTAAAGATTACACTATGGAAAAAACAGGGGATACCAAAGATTACACAATGCAAAAAACA
GGGGAAGCTAAAGATTTTGTAGCCCAAAAAAGAGGGGATACAAAAGACTACACTTCACAA
AGAACAGGGGAGGCCAAAGATTATGTTGCTCAAAAAACAGGGGAAATTCAAGAACAGAGC
AAAGGTGCAGCAAGTTATGTAGGAGAAAAGGCAGCACAAGTTAAAGATGTTACATTAGAA
ACAGGGAAAGGCGCGGTAGGATACGCAGGGAAAGTAGCAGAAACAGTGAAGGACAAAGCG
GTTGTAGCTGGATGGGGAGCTGCACATTTCACTGCTGAAAAAGCTGCAGATGCAACTAAA
GCTATAGCTGGTGTTACTTCTACTGTTGCAGGGTATGCCGGAGGAACGACGGTGGCCGCG
AAGGATTTGGTTGTTGATGCTGGAAAGAAAACAGTGGGATTTGCAGAGGATACGTTGGCT
GCTGCGAAGGATTATGTAGTTTCAGCTGAGGAAAGTGCAGCAGAGTATGCAGCTAGGAAA
AAAGCAGAAGCAGAGAGAGAATTAGAAGCTAAGAAATTACAAGAAGACACCAAGGGAGAA
AACAGAAGAGGGTTTATTCCAGGAGAAAAGGTTGAAAGAAGAAAGGAGAAAACAGAAGAA
TCCTACTTCGAGGAAGAAGAGGAGTCGGGAGTCGGAAAAGAAAGCAAGCCGGTGGAAGGT
GCAGCGGTGGTGTTGCAAGCCATTGGCGAAACTATAGTTGAGATTGGGAAAACAACTACT
GAACTTGTTGCAGGTCGCGGTGGAGATGAACCAGTTGTGGGAATTGAGAAAGAGTCTACT
ACCACAATCAAGAAAACTTGAGATGACATATATCGTTTCGTTTTGATTTGGTTTTCGATT
GGTTTTGTTTTTCTGGACTATTGAATAATAATTAGCATAAATCGCGTAGACTTGTGTACT
ATGTATGTTCTCATGTTAATAGTAGTGTTGTTCTCTTGTCACATTTAGCCTTATTATAAG
GCGACTCTACGATGTATCGTTTCTCCTTATGAACAACAATTACCAAGCATTGGGAGTTGA
TAATTGTTTACAATGGGGATACAAATATGTTGTTCTTAATGGGATATTGATGGTTGTCCA
CAA
