Microarray Probes on PGSC0003DMT400051403

Probe IDChipProbe Sequence
CUST_49481_PI426222305 JHI_St_60k_v1 CAGATCTTGTGATTCTGAAAGCTCTATTTATGAAGCTGTTCTACATTGCAAAAGAAACCA

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400051403

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Source Transcript PGSC0003DMT400051403 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT5G52900.1 +3 5e-30 117 93/239 (39%) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:21452893-21453692 REVERSE LENGTH=235

Transcript Sequence (1368 bp)

>PGSC0003DMT400051403 1368 pgsc_dm_v3.4
ATTTTATTATATATAGTATTTATTCCTTATATGAATGAAGCTAGAGTTCTTCATTCATTG
AATTCATAAAATCTTTTTCTCTTTAATTTCTTTGTGATTTTCTTAGTTTCCGTAGTAAAT
TTGATTATCGAGGAGATATGGAAACTTCGCAGTCTCTCTCGATTGAGAGTTTTTCGTATA
GTTGGTTAGTAGATTTGGGGGATTCTTTCAGAGCTGCTATGGATGATTCTGGAGATGATT
ATGAAACTGCTTTTATTGAGATGGATCCTGCACTACCTCCATCAAAGAGGTTTTTTAATG
TGAATCCACAGGATTTGAACTTTGATTTTCCTACATCGGATTCTTCTTCAACTCTTGTTC
ATGCTGATGAACTCATTTCAAACGGCTTCTTGATGCCTCTGTTCATCAAGAAGCCGATGA
AGATGGAGTTGGATTACGATGTAATTGAATCCGACTCCATCGTGAATTCTCCTGATGCGC
AGCAGGAGGATGAATCGCGTTCGTCCTCTTGCAGGAGGGTGAATCGGTGTGTATCGTTGA
GGAGATGCCGGAGTTTGTCGAGGAGGATTTTGTTGAAGTATTTTGATTTTCTTAGACCGT
TTTGCCAGAAAATAAGAAGGTGTAGTAGAATTGGTAGGTGCAGATCAAGTAGTGGAAAGG
AAGTGATGAAGAAGTGGGACTATTGTTCAGCAGCAACATCTCCAAGGACAAGTGTAGCTT
ATTCTGTTGATAATTGGCGCAGATCTTGTGATTCTGAAAGCTCTATTTATGAAGCTGTTC
TACATTGCAAAAGAAACCATTAATGGTAAATAGAGAAAATGAGAAGCAAGTAATATGGGA
TGAGAGGTCTAAAGAAGTTCACATGTGACTGAGGGGTCGTTTGGTGTGAGTGATAGAAAT
AAATAGTGATGAGATAAGAAAATAGTGATAGGATAAAGTTTTTGTATCTTGTTTGGTTGC
CATGTTTGAGATAATTTATCCCACCATTTATATCATAGTGATGGAATAAGTTATCTCGTA
TATATGGTAGAATAAGTTATCCCAAAATAGTTAATCCCAAAATAACGTATCCTGAAATAA
CTTGTTACCAATCAAACGACCCTGAATCCATTAATTGTCACTTTGTATAGCTCTTTCTCT
TTTCTTCGGGATTGTGAATATTTTGTCTTCTTGAAGGAAGTGGAAAAAGCTTGTAAGGAA
GGGACTGTGTCAGCCATGAGAAAAATATTCTTTGGAATTTTTGAAGATACGATATATCTT
CATCATGACTCATACTATTTTATTTTATTTTGTCCTTTTTTTTTCTGCACAATTTCAACT
AGGGAATTGTCTTGCTTTTGTGATTTGTATAAAGTTTTTATGGGAATA