Microarray Probes on PGSC0003DMT400051047
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_6530_PI426222305 |
JHI_St_60k_v1 |
GAAACTGAATTTTTGGTTCATTGAAGGAGGGAGAATTTACTTGACCCGTATTTTAGTAGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400051047
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400051047 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G80840.1 |
+3 |
2e-76 |
249 |
161/344 (47%) |
WRKY DNA-binding protein 40 | chr1:30383834-30385356 FORWARD LENGTH=302 |
Transcript Sequence (1956 bp)
>PGSC0003DMT400051047 1956 pgsc_dm_v3.4
TCCAAACTTCAAACCCCCCAATTACATACCTTCCTATTCTCTCTTACAAATTTCAATCAA
AATTAAAGCAAATGGAATTCACCAGTTTAGTTGATACTTCTTTGGATTTGAACTTTAGAC
CTCTTCGAGTTTCCGATGAATTACCGAAACAGGAAGTTGAGAGTAATTTCATTGGACTTG
GAAGAGATCCTGTACTACCTATCAAAGATGAGACAGGTAATTTAATGGAGGAACTAAATA
GAGTAAATGCTGAAAATAAGAAATTGACGGAGATGCTTACAGTTATGTGCCAGAATTACA
ATTCATTGAGGAGTCAATTGACGGAATATTTGAGCAAGCAGAATAGTAGTACTAGTGGAG
CTGATCAGGATCAGAACAGCGATGGATCGAAGAAAAGAAAAGTTGAAAACAATAATAATG
AAATTGTGAAATCGTCAGTTCAACTGTTGAATTCAGATAGCAGTTCAAGTGATGAAGATT
CATCTCCAAATAAACCAAGAGAAGAACACATTAAAACTAAGACTTCTAGAGTTTATATGA
GAACTGAACCATCTGATACTTCTCTTATAGTGAAAGATGGATATCAGTGGAGGAAATATG
GTCAGAAAGTAACAAGAGACAACCCATCTCCAAGAGCTTATTTCAAGTGCTCTTTTGCTC
CTACCTGCCCCGTTAAAAAAAAGCTTCAAAGAAGCGTGGAAGACCAATCGATTCTAGTAG
CAACATATGAAGGAGAACACAACCATTCTAAAGTGGATACTGTTACAACAACTTCCCCTT
CTAGCCGTTTCAACCCGAAAAACAATGTTTCGGGTAATTATACTGCTTCAGTAATGCCAA
GTTCCACTACTAATATATCAAGACCAAAACCAATGTTAACTCTTGATTTGGCTGAACCAA
AAACATCACAAAATGATGTCAAAAAAGTGAACAGCAATACAAGTAGTGCAAGTGGTCACA
AGCGTAAATCACCAGGAAATGATCATCAACAACACCAAAATAGACCAGAGTTTCAACATT
TCTTGATAGAACAAATGGCTTCATCATTGACTAAAGATCCAAGTTTTCAAGCAGCCTTAG
CCGCCGCCATATCGGGAAAATTCTTGCAAAATAATAATAATAACACTATTGATAAATGAA
TGAATAATTAAAACGAAAATTATGTCTCACATTGAAATGTTGCAGAGAAAGACAGGTCGC
CACTAGGACATGTTGTATATAGTGTTTACTATTTTTATTGGAGAACAGTAGGCAGTAGGT
TGGACTAGTAAGTGCACGTGGAAATGGAATGTGCTAATTTTCTATAGCAGCCTATATTAG
TTAGGTCTCAATTTGCGCCTTTCAGTCTCACAAGATTGAGACTTTTGGTGGTCCTAAATT
AAATTGTTGAATTTGCTCAAATAAATATTTAATAATTTGATTTCTCCTCCTTACTTTTGT
GTAGACTATGGCATCTCTAACTTGTTATATTCTTTTGGGCGTTACTGAAAAGAAAAGAAA
AAACAGGAGATACATCATACATAAAAGGGGTAAGAATATTCTTAATTGTGCGAGTATTTT
AGGAAAAACTGTACAGATTCAATCCAAAGTGGATAATATCATAATATCTTTGAACTATTT
TAGCATGACAAGCTCATTTGCTACTTGTTTTTTTAAATTGGTTTCTATTCTATTCGACTA
AGGTCAAGAAATGGAGGCCAAGTTGAAGTCAAAAGAAGAAAAGACCACACGTGAAACTGA
ATTTTTGGTTCATTGAAGGAGGGAGAATTTACTTGACCCGTATTTTAGTAGAAAAAAATT
CTTGATCTAGGGATTAAAATAAGGGAATTCAGGGGCATTTTGAGACTATAAATTGAAATA
GATATTGGTTTCTAAATGTTAACATCAGCCACTTGATGTCATTGCTTCAATATTTATATC
CTATTTAAAAGACGAGATGTAATTTTTTGGTGGAAT
