Microarray Probes on PGSC0003DMT400050794
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18448_PI426222305 |
JHI_St_60k_v1 |
ATTATCTGCGGAGTTCTCCACAAAGGATAAGTAAGGTCTTCAATTACATATGCTCTGTTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400050794
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400050794 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G25410.1 |
+1 |
2e-06 |
48 |
48/168 (29%) |
RING/U-box superfamily protein | chr2:10814470-10815917 FORWARD LENGTH=377 |
Transcript Sequence (725 bp)
>PGSC0003DMT400050794 725 pgsc_dm_v3.4
GGAAAGAATAGAATCAAGACAGTACAAATGTATTTGTGTAGGGGAACTATTCTGCTTAAA
TATTTTCCATTAATCCTTTTAATCATCTTTCTGCAAACATGCAATGCTAGGAAGAGCAAA
TCCTACTACTGTCCTTCTGCTTGTGGCCATATCCGTAACATAAGCTACCCTTTTCGCTTA
AACACTGATCCAGAACATTGCGGATATGGTCTAGCATTTGAGTTAGCTTGTGAAAGTAAC
CAAACAGTTATATGGTTATTCTCCAAGAAGTTTTACGTTCAAGCCATCAACTATAATAAT
GAGACAATTCACCTGGTAGATCCAACTTTACAAACACAAGATGATCTATGCTCTTTCAAA
CCTCAGCATAACTTGTTCAACAAAGCCAATACAATCTTCCACTCATACTATGTAGCAGAT
CCCATTTTCATGATCAACTGTCCATTTGCTGTTAATAATTATTCGACATTTGTGGAAATT
ATTGGTCTGCAAATTAAGCAGACACACTTATTTAAAGATTGGAGTTATAGATGCCTCTGC
ACTCACCGATGGATGCAGAGTGGAATTTATAGGCTGGACCTCATGGCCTAATATTATTTA
TACAGAGAACAACAATTCCCTTTCTGATTTTCATCAAGCCATCCTCTACGGATTTGAGCT
TCGTTATTATCTGCGGAGTTCTCCACAAAGGATAAGTAAGGTCTTCAATTACATATGCTC
TGTTC
