Microarray Probes on PGSC0003DMT400050495
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42103_PI426222305 |
JHI_St_60k_v1 |
GTGTGGAGTCAACCAATGGTCTTATGCTGTTTACTGGAAGATCGGTTGCCAGAACACAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400050495
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400050495 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G27230.1 |
+1 |
2e-93 |
317 |
214/424 (50%) |
transcription factor-related | chr2:11650895-11653840 FORWARD LENGTH=650 |
Transcript Sequence (3906 bp)
>PGSC0003DMT400050495 3906 pgsc_dm_v3.4
CTCAGCACCACCTATTTTTACCCCCTTCCTCTTCCCTCTCTGATGCTACTACTTCTTCTG
GTGATGAAAAAAAGCACACAGAGCAAAAACACTAACAGCAGCCTCCTCTCTCAACTACCC
ACTTCCCAAAGAAACACATAATACACACAGTGATTACACTTTGGAACACCAAAGATTCTA
TTTTTAACATCCCCAAGAATCAAGAACACACTGAAAACTAATAAAGCTTTGATCTGTACT
CTCTTTAGTCACTAAAGATTCATATATTTGTTGGGTTTTTGTTAAAAATGGAGAAAATTG
TGTTTGTTGTCAACTGTGAACTTAAAGCTTGTGGTATAGTGTAGTTTTCTTCTCCATTTT
CTTGGCTGAGGAAAACAGAAGTTCTTTTTTTTTTCTTCGTCTTTCAGTTTCAACCTTTTT
TTTCTACCCATAGAATGGGTTGCAGGCTAAAATCAGTAGAAAATTTGGATCCTGTGAGAA
AAAGAAGTGGTGGACTGAGAACTAAACAGGCAGGGCGTGGGTCTTGCAGGGGGAGTTAGT
TTCTTTAATCTGTAATTTTTTAGCTGAGAAAATTTGGAAGTGAATAAACAAAAGAATAGT
GCAAAAATGGGGTATTTGCTGAAAGAGGTTTTAAAGACTCTGTGTGGAGTCAACCAATGG
TCTTATGCTGTTTACTGGAAGATCGGTTGCCAGAACACAAAGCTTTTAATTTGGGAAGAA
TCCTATTATGAACCTTCAACATTCTCCGGAATTCATGGAATTTCGGGGGTTGAGAATTCG
GAACTATCATTCCATGATTGGGGGGTTTGCTGGGGTTCGGGGGAGGTACGTAATCCTCAG
CTTATGAATCAAGCAGGGGAGAGAGTGCATATGCTTGTAAACAAAATGATGATGGAAAGT
CAAATCAATATAGTAGGAGAAGGACTAGTCGGACGGGCTGCAGTTACTGGGAGTCATCAG
TGGTTTCATTCAGAGGGTTTTAATAGAGTAGTTCATCCACCAGAGGTCCTGAAAGAGCTC
ACAGGACAATATTCTGCTGGCATCCAGACAATTGCAGTTGTTCCTATTCTTCCTCATGGT
GTCGTCCAATTTGGATCATGCTTGCATATAATGGAGAGCACGAGTTTTGTGGAGGATGTG
AGGATACTGATAAGTCAACTAGGATGTGTCCCTGGTGTCTTGTTATCCGATGAAAATGCA
ACGAAAGATCTGATGGTGAATACTGGCACACCAGTTTATCTGGGAAGTTCAAGTCTTGTA
GATTCTTGTGTGAGCACAAACGTAATGAACTCTGCTCCGGTTATTGCTAGCTGCAGTTAT
CAGGGCAACTCAAGTCAGACTGATGGTTTTATTTGTCAAACTTCTTCCTCTATGGCTGCA
CAAGTTCGGGATAGAATAATGCAGTCTACCGATGCAACATTTCCAGCGTCCAATATGACC
CAATGTTTTGTTGAATCTCATGATGATCGTCAGTTTCACAAAAAAATTATTCCAGAGGTG
AAAGCACATCTGTCTCCTAATAGCCAGCTAATAAATAACGTGATTAAAGCGGAGGTAATT
TCTCCAAGCTCTAACATGTGGATGAGTCAACAAGCTCCTTCACACATTCCGAGGCCTCCT
TTTCATCAGCAATCTTTTACTGACTCATTAACTGTAGATAGCGGCAGCTTAAGCAATGTA
TCCCAGCTTAATGGTTTCACTGCATCTGATCCAAGACCCAATGATGTCCTGATCTCTAGT
TGTCATGGAAATTCAATTTCTCCATCCACTGGAGAAAATGAACTATGTAAACGAGGGGAT
GGGCATCACCGATCAATTCCATTCCCCAATTCTACTGCTGATGCCAATGGACTATCAAAC
ATAATCAGTTCTTGCACAAAGTCGGCTGGAAATGGGCTTCAAACCACGTCAAAATTAAAT
GTTGGGGATGATTTGATAACTCGTAATATTTCTGATGGTCTGAATGCACAATTTATGTGG
GATGAGAGTAATGGAATAGTCGAAAATGATTTGTTTCAAGCACTTGGAATTATGCTAACA
CAGAATGAGCATCCATGTAGTACAAGCAAGTTGGTGCAAGAGGTTTGTGGTGAAAAACAT
GAATATGTGGGGCAGAGTGCATTGCTTGAAAACAACAAGTATGAAGATTCCTGTGTCCAA
CGTCACTCGGGGGATGACCTGTTTGATGTTCTGGGTGCTGATTTTAAAAATAAACTATTC
AATGGAAGCAGGAACAGTTATCAAAGTAATGGACCAGACTCAAACACATGGGATCGGGTT
AAGAGTAACTCTACTTCTGTGATTAGTCAGCATGCTTCTTTGATAGTCAATCAAGGAAAA
TCAGATAGTGGATCATTCTTTGTGGCTGGTTTTGAGCGATTTTTGGATTCTATAGCGTCC
AAGCCTTCTGCCAAGCAGAATCTGGATGATGATGTTTCTTGTCGGACAACGTTGACAAAT
TTGAGTAGCTCCTCTGCTCCAAATATCTCATCGTCCTATGGCCGAGCTGATTTCTCGAGT
CAAATTCAAGGAGATGTATTTGGGAAACCCAAGAACCTTGCAAAATCAGGAACAACGGTT
TCTCGGTCATTTAGATCCGATAAAGAAAAGACAGGAGCTTATTCGCAGAGTAGTTCAATT
TATGGGTCACAAATTAGTTCATGGGTGGAACAAGGTCATGATACAAAGCCAACTAGCAGT
GTTTCTACTGGATATTCTAAAAAGCCTGATGAGACGAGCAAGACTGGTCGCAAAAGGCTT
AAACCAGGAGAGAATCCTAGACCTAGGCCAAAAGATCGGCAAATGATCCAAGATCGTGTG
AAAGAACTGCGAGAAATTGTTCCAAATGGGGCAAAGTGTAGCATTGATGCACTATTGGAA
CGCACGATCAAGCACATGCTTTTCTTGCAGAGCGTCACAAAACATGCGGACAAATTAAAA
CAGACTGGAGAGTCAAAGATTATCAGCAAGGAAGGAGGATTGCTTTTAAAAGATAATTTT
GAAGGAGGAGCGACGTGGGCATATGAAGTTGGTTCACAGTCTATGGTCTGCCCGATCATA
GTTGAGGATCTGAATCAACCTCGTCAAATGCTCGTGGAGATGCTTTGTGAAGAACGCGGT
CTATTTCTGGAAATAGCCGACATAATAAGAGGATTGGGCTTGACCATCTTAAAAGGGGTT
ATGGAAACGAGGAACGACAAAATATGGGCGAGGTTTGCTGTAGAGGCAAATAGAGACGTG
ACGAGGATGGAGATATTCATCTCACTTGTTCGCCTCTTGGAGCAAACATCAAAAGGCGCA
GAGGAATCTGCTAAGGCCATTGATAACGACACAGCAATGATGCATTCGTATCACCAAGCA
GCGTCTATACCAGCAACAGGTAGACCTTGTACTTAACAATGCTCAACAGATGAGAGACTG
TGATCTTTGTCTGGACGTGTTAAGAGCGAGCAATCAACCATGCTTGCCATGACTAACATT
GTACACTTAGGCCAACCCTCGTGGTTTTTCTCAAAGCTAATCCTCATTTTTCGCCACAAT
ATCCAGATTCTCAACGTGCCAAGCCTTTTAGTCCCTTCTCAGGATTGCTTTTGTAGAATG
GCGATTCATCGTTCGGGCTAGTTTTTTTTTTTTTTTTGGCTCTTGCCCTTTGAAGTACTA
TAATTTTGATTTGGTACAAGGAGAAGGGAAATGGTTTTTATTGTTGTATAGAAAAAGGTG
GAGGGTAATAGGAAGTAAGCTTAGGGTTGTTTATTTTAGCTAGTATTTGTCTACTTAAAA
TGTTTTTTCTGGCTTTAATTATGTGTTTTTTGCCAGCTGAAATATTCTTGTTTGCATTAT
TATTTACTTACCTTTGGCCGATATCATTTCTATCATTCTATGGAAAGTGAAAGTCGTTTC
ATTCGG
