Microarray Probes on PGSC0003DMT400050489
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42074_PI426222305 |
JHI_St_60k_v1 |
CTCCATTTAAACTCATCTCAGTCCTAATATTGCAAGCGTTTTGACTATAGGAACTCATAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400050489
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400050489 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G27290.1 |
+1 |
5e-21 |
91 |
43/48 (90%) |
Protein of unknown function (DUF1279) | chr2:11678586-11679765 REVERSE LENGTH=201 |
Transcript Sequence (1243 bp)
>PGSC0003DMT400050489 1243 pgsc_dm_v3.4
TTAAATGATTTCAGATATTTAGCTCAAAAGAGGATGGAGATGAAGAGAACAAGGATAAGA
AATCAAAAGGGGATCAAGCAAAAGAGCTTTTGGCAAAATATGGAGGAGCTTATTTAGCAA
CTTCCATTACTCTCTCATTGATATCATTTGGTCTCTGTTATGCTCTCATCAATTCTGGTG
TTGATGTTCAATCCTTGCTACAAAAGGTACACTTTTTCCAACACAAACTTGCTATTAAGT
TTTGTTTGAATGAATTAGTAGAAAAGGAGGAAAGAGATATAATGTGTTCTTGCACCTCCA
AGGTGTGTGGCCTGGCAGCTATGCTGCTCGGATTCTTCAGAAATGTTGGCTGGTTCATGT
TGGATCCTCCAAAAGAATGTCTTCTTACACCTTTAAGGTGTGACATGGTTGTCTATGCTG
CTCGGCCTCTTCAAAGCTGTTGTCGGGTGCATTTTGGATTCCCAAAAGTAGTGCGCAACA
AATTTGAAGAGTCCGAGTAATATAGTCTGGCAGTCAATGAAAATTGAGATAATATCTCAA
ATGGTCACTCAACTATGAGATTTTTTTCTCAGAAAGTCACTCAACTTTGATTTTTTAATT
AAAATCTCCATAGTTGAGTGACTTTCTGAGAGAAAAGCACATAGTTGACCGACTTTTTCA
TAGTTGAGTAATTTATCGTGTACTGATGAGGAGATGCATGAATACGATGTAAAGTGTAGG
TTGGCATGTTACAACTGCTATTACTACGTCTCAATCTCAAACAAGTTAGGATTGGCTAGT
ATGAATTCTCGTCGTCCATATTGCTCCATTTAAACTCATCTCAGTCCTAATATTGCAAGC
GTTTTGACTATAGGAACTCATATATATATTTTGCAGGTGGGAATTTCTACTGATGAGACT
GGTGAGAAAGTGGGAACTTTTGCATTGGCTTATGCTGCTCACAAAGCTGCATCACCTATT
AGATTCCCCCCTACTGTTGCTTTAACACCAATTGTTGCTAGTTGGATTGGAAAGAAAGTT
GATAAAGAGAAGTAAAACTAGGTTGATTTTGAACACAATTTTGCTGCAGATATAATATGT
GTGTTAGTAAATACTACAGGTTAATTATCTTACTAGTATTTGATTGTTATAGCCAAGTAT
AACAACACTGTTGATAAGTGCAAGATTTAGCTCAGTATATAACTGGAAATACAGGTTTTC
ATCGATGTTCTATCGTTCTTCTCAATTTAGCCTCAATCCACAA
