Microarray Probes on PGSC0003DMT400049797
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_20332_PI426222305 |
JHI_St_60k_v1 |
CTTCCCAGATTCTTCAAACACAACAATTTCTCGAGCTTTGTCAGACAGCTAAATACTTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049797
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049797 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G22830.1 |
+3 |
1e-112 |
347 |
186/356 (52%) |
heat shock transcription factor A6B | chr3:8078981-8080895 FORWARD LENGTH=406 |
Transcript Sequence (1873 bp)
>PGSC0003DMT400049797 1873 pgsc_dm_v3.4
CAAAGCTTCTTTATCCATGGTGTTCAGAGCAATTTATTCACTAAAATAACTCAACTTCTT
AACTGCATAAACTACCTTACCCAAAAGAGAAACTTTCCATTTCCAAAATCCAAAATCCAA
ACTTTTTTCTTCCTAAAAATACATATATTTTCCCCTGTTTCTTGATGATGAATCAATTGT
ATTCCGTTAAAGAGGAGTTCCCGGGGTCAAGTTCTGGTGGGGGTGAGCCCCCACCGTTGA
CACCACAACCAATGGAAGGGCTTCATGACATTGGTCCACCACCATTCCTTACAAAGACAT
ATGAAATGGTGGATGATTCAACTATAGATCATGTTGTTTCTTGGAACAGAGGAGGTCAAA
GCTTCGTAGTCTGGGATCCTCATGCCTTTTCGACTACACTACTTCCCAGATTCTTCAAAC
ACAACAATTTCTCGAGCTTTGTCAGACAGCTAAATACTTATGGATTTAGAAAGATTGATC
CAGAGAGATGGGAATTCGCAAACGAGGCATTTCTAAAGGGGAGTAAGCATCTTCTAAGGA
ACATCAAGAGGCGAAAAACGTCTAATTCTCCTACAGAGCACGGTCTCGGTCCTTGTGTCG
AATTGGGATTTGATGGAGAAGTTGATCGATTGAGGCGTGACAAGCAAGTATTGATGATGG
AACTAGTGAAGCTTAGACAGAATCAACAGAATACTCGAGCTTACATTCGATCTTTGGAGG
TAAAGTTACAAGGAACAGAGAGGAAGCAGCAACAAATGATGAATTTTTTAGCAAGAGCTA
TGCAAAATCCGGAGTTTGTCCAGCAGTTGATCCATCAAAAAGGGAAGAGAATAGAAATTG
AAGAGGATATAACTAAAAAAAGGCAACGACCTATTGATCATCAAGGTCCTAGTGCTAGTA
CATTACATGTTGGAGGATTTAGCCATTTCATAAAATCAGAACCCTTGGAATTCGGAGAGG
CTAACGGATTCCAAGTGTCTGAACTTGAAGCACTTGCATTAGAAATACAGGGATTTGGTA
GAGCAAGAAAGGATCAACAAGAAGAGTACACGATAGAAGGGCTCGAACAATTTGTCTACA
CGGATAAAGAACTTGATGAGGGGTTTTGGGAAGAGCTATTTAACGATGAGGATGTGTCTG
GAAATGAAGAGGAAGATGTAGATGTCTTGGCAGAGAGGTTAGGGTTCTTGGATTCGAACC
CTTAGTAAAAGCCTCAAACTAGTTTTGTCTCATGTGCTTTTTCAAGAACTCATTCATCAG
CTGGACCGTTACATCGAAATCTTGTATGAACCTACATTGTGCTATTTACTACTACTACTA
GTTAACTTATGTGTCTTGATTCTGTGTAGTGAGTTTTCAAGTATTCAACGACAAATGAAG
AAAGCAGCTATATGGATCAACCAGCTACTCGTTGGATAGATTCATGAAGGACTCAAGAGT
CAAGTCTGAAAATCCTTGTTGGTTTTTCTGGCATAGGTTATGCACAATTTGATCAAGTCT
ATGGTCTTTCAAGGTCATTTTGGGTAATAAAAAATGTCAACGGGTGCGTGTTGAATTCTT
CAAAAGTAATGTATTTCTGAAGAAACTGATACGAGTGCGGCATCAAAGTAATATTGAAAT
GTTGTCCTTGCTTGTGTGGTGAATAGATTGTTGTCTTTATGATGAAGACATAGGTAACAA
ACAGAAATCCCAATTACATCAGAATCAAGATTTCACCACAAGTGGCGGTTTGTAACTACT
TTGCTGACAAAGATTTAATTTGTTTGCCATTTAGTGTCCTTGTCTCTATTTGTGAGAAAT
GAATCATGTCCAATTGTCCATGTTCCATAGAAAAAAAATCTCCTTCTTTTGTTGGCTCTA
GAAATGAAAATTT
