Microarray Probes on PGSC0003DMT400049795
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_20286_PI426222305 |
JHI_St_60k_v1 |
GAGAGCAAAGCTTCTTTATCCATGGTGTTCAGAGCAATTTATTCACTAAAATAACTCAAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049795
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049795 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G22830.1 |
+3 |
4e-110 |
338 |
182/348 (52%) |
heat shock transcription factor A6B | chr3:8078981-8080895 FORWARD LENGTH=406 |
Transcript Sequence (1683 bp)
>PGSC0003DMT400049795 1683 pgsc_dm_v3.4
CAAAGCTTCTTTATCCATGGTGTTCAGAGCAATTTATTCACTAAAATAACTCAACTTCTT
AACTGCATAAACTACCTTACCCAAAAGAGAAACTTTCCATTTCCAAAATCCAAAATCCAA
ACTTTTTTCTTCCTAAAAATACATATATTTTCCCCTGTTTCTTGATGATGAATCAATTGT
ATTCCGTTAAAGAGGAGTTCCCGGGGTCAAGTTCTGGTGGGGGTGAGCCCCCACCGTTGA
CACCACAACCAATGGAAGGGCTTCATGACATTGGTCCACCACCATTCCTTACAAAGACAT
ATGAAATGGTGGATGATTCAACTATAGATCATGTTGTTTCTTGGAACAGAGGAGGTCAAA
GCTTCGTAGTCTGGGATCCTCATGCCTTTTCGACTACACTACTTCCCAGATTCTTCAAAC
ACAACAATTTCTCGAGCTTTGTCAGACAGCTAAATACTTATGGATTTAGAAAGATTGATC
CAGAGAGATGGGAATTCGCAAACGAGGCATTTCTAAAGGGGAGTAAGCATCTTCTAAGGA
ACATCAAGAGGCGAAAAACGTCTAATTCTCCTACAGAGCACGGTCTCGGTCCTTGTGTCG
AATTGGGATTTGATGGAGAAGTTGATCGATTGAGGCGTGACAAGCAAGTATTGATGATGG
AACTAGTGAAGCTTAGACAGAATCAACAGAATACTCGAGCTTACATTCGATCTTTGGAGG
TAAAGTTACAAGGAACAGAGAGGAAGCAGCAACAAATGATGAATTTTTTAGCAAGAGCTA
TGCAAAATCCGGAGTTTGTCCAGCAGTTGATCCATCAAAAAGGGAAGAGAATAGAAATTG
AAGAGGATATAACTAAAAAAAGGCAACGACCTATTGATCATCAAGGTCCTAGTGCTAGTA
CATTACATGTTGGAGGATTTAGCCATTTCATAAAATCAGAACCCTTGGAATTCGGAGAGG
CTAACGGATTCCAAGTGTCTGAACTTGAAGCACTTGCATTAGAAATACAGGGATTTGGTA
GAGCAAGAAAGGATCAACAAGAAGAGTACACGATAGAAGGGCTCGAACAATTTGTCTACA
CGGATAAAGAACTTGATGAGGGGTTTTGGGAAGAGCTATTTAACGATGAGGATGTGTCTG
GAAATGAAGAGGAAGATGTAGATGTCTTGGCAGAGAGTGAGTTTTCAAGTATTCAACGAC
AAATGAAGAAAGCAGCTATATGGATCAACCAGCTACTCGTTGATTCATGAAGGACTCAAG
AGTCAAGTCTGAAAATCCTTGCATAGGTTATGCACAATTTGATCAAGTCTATGGTCTTTC
AAGGTCATTTTGGGTAATAAAAAATGTCAACGGGTGCGTGTTGAATTCTTCAAAAGTAAT
GTATTTCTGAAGAAACTGATACGAGTGCGGCATCAAAGTAATATTGAAATGTTGTCCTTG
CTTGTGTGGTGAATAGATTGTTGTCTTTATGATGAAGACATAGGTAACAAACAGAAATCC
CAATTACATCAGAATCAAGATTTCACCACAAGTGGCGGTTTGTAACTACTTTGCTGACAA
AGATTTAATTTGTTTGCCATTTAGTGTCCTTGTCTCTATTTGTGAGAAATGAATCATGTC
CAATTGTCCATGTTCCATAGAAAAAAAATCTCCTTCTTTTGTTGGCTCTAGAAATGAAAA
TTT
