Microarray Probes on PGSC0003DMT400049793
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_20361_PI426222305 |
JHI_St_60k_v1 |
CTTCCCAGATTCTTCAAACACAACAATTTCTCAAGCTTTGTCAGACAGCTAAATACTTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049793
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049793 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G22830.1 |
+1 |
5e-115 |
352 |
186/353 (53%) |
heat shock transcription factor A6B | chr3:8078981-8080895 FORWARD LENGTH=406 |
Transcript Sequence (1734 bp)
>PGSC0003DMT400049793 1734 pgsc_dm_v3.4
ATTGCTGACTCTTCTTTTTTTATTAATAGCCTTTTAGCACTTACTTCCAAAGCTTCTTTA
TCCATGGTGTTCAGAGCAATTTATTCACTAAAATAACTCAACTTCCTAACTGCATAAACT
ACCTTACCCAAAGAGAAACTTTCCATTTCCAAAATCCAAAATCCAAACTTTTTTCTTCCT
AAAAATACATATATTTTCCCCTGTTTCTTGATGATGAATCAATTGTATTCTGTTAAAGAG
GAGTTCCCGGGGTCAAGTTCTGGTGGGGGTGAGCCCCCACCGCTGACACCACAACCAATG
GAAGGGCTTCATGACATTGGTCCACCACCATTCCTTACAAAGACATATGAAATGGTGGAT
GATTCAACTATAGATCATGTTGTTTCTTGGAACAGAGGAGGTCAAAGCTTCGTAGTCTGG
GATCCTCATGCCTTTTCAACTACACTACTTCCCAGATTCTTCAAACACAACAATTTCTCA
AGCTTTGTCAGACAGCTAAATACTTATGGATTTAGAAAGATTGATCCAGAGAGATGGGAA
TTCGCAAACGAGGCATTTCTAAAGGGGAGTAAGCATCTTCTAAGGAACATCAAGAGGCGA
AAAACGCCTAATTCTCCTACAGAGCAAGGTCTCGGTCCTTGTGTCGAATTGGGAAGATTT
GGATTTGATGGAGAAATTGATCGATTGAGGCGTGACAAGCAAGTATTGATGATGGAACTA
GTGAAGCTTAGACAGAATCAACAGAATACTCGAGCTTACATTCGATCTTTGGAGGTAAAG
TTACAAGGAACAGAGAGGAAGCAGCAACAAATGATGAATTTTTTAGCAAGAGCTATGCAA
AATCCGGAGTTTGTCCATCAGTTAATCCATCAAAAAGGGAAGAGAATAGAAATTGAAGAG
GATATAACTAAGAAAAGGCGACGACCTATTGATCATCAAGGTCCTGTTAGTACATTACAT
GTTGGAGGATCTAGCCATTACATCAAATCAGAACCCTTGGAATTCGGAGAGGCTAACGGA
TTCCAAGTGTCTGAACTTGAAGCACTTGCATTAGAAATGCAGGGATTTGGTAGAGCAAGA
AAAGATCAACAAGAAGAGTACACGATAGAAGGGCTTGAACAATTTGGCAACACAGATAAA
GAACTTGATGAGGGGTTTTGGGAAGAGCTATTTAACGATGAGGACGTGTCTGGAAATGAA
GACCGTGAAGAGGAAGATGTAGATGTCTTGGCAGAAAGTGAGTTTTCAAGTTTTCAACGA
CGAATGAAGAAAGCAGCTATATGGATCAACCAGCTACTCGTTGGATAGATTCATGAAGGA
CTCAAGAGTCAAGTCTGAAAATCCCTTGTTGGTTTTTCTGGCATAGGTTATGCAGAATTT
GATCAAGTCTATGGTCTTTCAAGGTCATTTTGGGTAATAAAAAATGTCAACGAGTGCATG
TTGAATTCTTCAAAAGTAATGTATTTTTGAAGAAACTGATACGAGTGCGGCATCAAAGTA
ATATTGAAATGTTGTCCTTGCTTGTGTGGTGAATAGATTGTTGTCTTTATGATGAAGACA
TAGGTAACAAACAGAAATCCCAATTACATCAGAATCAAGATTTCACCACAAGTGGCGGTT
TGTAACTACTTTGCTGACAAAGATTTAATTTGTTTGCCATTTAGTGTCCTTGTCTCTATT
TGTGAGAAATGAATCATGTCCAATTGTCCATGTTCCATATAAAAAAAAATCTCC
