Microarray Probes on PGSC0003DMT400049789
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_20287_PI426222305 |
JHI_St_60k_v1 |
CTTCCCAGATTCTTCAAACACAACAATTTCTCGAGCTTTGTCAGACAGCTAAATACTTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049789
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049789 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G22830.1 |
+3 |
6e-64 |
220 |
130/283 (46%) |
heat shock transcription factor A6B | chr3:8078981-8080895 FORWARD LENGTH=406 |
Transcript Sequence (2071 bp)
>PGSC0003DMT400049789 2071 pgsc_dm_v3.4
CAAAGCTTCTTTATCCATGGTGTTCAGAGCAATTTATTCACTAAAATAACTCAACTTCTT
AACTGCATAAACTACCTTACCCAAAAGAGAAACTTTCCATTTCCAAAATCCAAAATCCAA
ACTTTTTTCTTCCTAAAAATACATATATTTTCCCCTGTTTCTTGATGATGAATCAATTGT
ATTCCGTTAAAGAGGAGTTCCCGGGGTCAAGTTCTGGTGGGGGTGAGCCCCCACCGTTGA
CACCACAACCAATGGAAGGGCTTCATGACATTGGTCCACCACCATTCCTTACAAAGACAT
ATGAAATGGTGGATGATTCAACTATAGATCATGTTGTTTCTTGGAACAGAGGAGGTCAAA
GCTTCGTAGTCTGGGATCCTCATGCCTTTTCGACTACACTACTTCCCAGATTCTTCAAAC
ACAACAATTTCTCGAGCTTTGTCAGACAGCTAAATACTTATACGAATTAAGATCTGGTGA
TGTTCCTCTGATGAATCCTTCAAGTTCTGGTGGTTGGTATAACATATTAAAATATTCATC
GTGCTGCGGACCCAAAAAAAAAAAAAAGCACTAGTGTCAAGAATTGTTTGCTAAGATGGA
TCTTGGAAAAATTTGGAAGATGATGATACTAAGCTGTAGATGGGATTTGATTGTTGCAGG
GATTTAGAAAGATTGATCCAGAGAGATGGGAATTCGCAAACGAGGCATTTCTAAAGGGGA
GTAAGCATCTTCTAAGGAACATCAAGAGGCGAAAAACGTCTAATTCTCCTACAGAGCACG
GTCTCGGTCCTTGTGTCGAATTGGGATTTGATGGAGAAGTTGATCGATTGAGGCGTGACA
AGCAAGTATTGATGATGGAACTAGTGAAGCTTAGACAGAATCAACAGAATACTCGAGCTT
ACATTCGATCTTTGGAGGTAAAGTTACAAGGAACAGAGAGGAAGCAGCAACAAATGATGA
ATTTTTTAGCAAGAGCTATGCAAAATCCGGAGTTTGTCCAGCAGTTGATCCATCAAAAAG
GGAAGAGAATAGAAATTGAAGAGGATATAACTAAAAAAAGGCAACGACCTATTGATCATC
AAGGTCCTAGTGCTAGTACATTACATGTTGGAGGATTTAGCCATTTCATAAAATCAGAAC
CCTTGGAATTCGGAGAGGCTAACGGATTCCAAGTGTCTGAACTTGAAGCACTTGCATTAG
AAATACAGGGATTTGGTAGAGCAAGAAAGGATCAACAAGAAGAGTACACGATAGAAGGGC
TCGAACAATTTGTCTACACGGATAAAGAACTTGATGAGGGGTTTTGGGAAGAGCTATTTA
ACGATGAGGATGTGTCTGGAAATGAAGAGGAAGATGTAGATGTCTTGGCAGAGAGGTTAG
GGTTCTTGGATTCGAACCCTTAGTAAAAGCCTCAAACTAGTTTTGTCTCATGTGCTTTTT
CAAGAACTCATTCATCAGCTGGACCGTTACATCGAAATCTTGTATGAACCTACATTGTGC
TATTTACTACTACTACTAGTTAACTTATGTGTCTTGATTCTGTGTAGTGAGTTTTCAAGT
ATTCAACGACAAATGAAGAAAGCAGCTATATGGATCAACCAGCTACTCGTTGGATAGATT
CATGAAGGACTCAAGAGTCAAGTCTGAAAATCCTTGTTGGTTTTTCTGGCATAGGTTATG
CACAATTTGATCAAGTCTATGGTCTTTCAAGGTCATTTTGGGTAATAAAAAATGTCAACG
GGTGCGTGTTGAATTCTTCAAAAGTAATGTATTTCTGAAGAAACTGATACGAGTGCGGCA
TCAAAGTAATATTGAAATGTTGTCCTTGCTTGTGTGGTGAATAGATTGTTGTCTTTATGA
TGAAGACATAGGTAACAAACAGAAATCCCAATTACATCAGAATCAAGATTTCACCACAAG
TGGCGGTTTGTAACTACTTTGCTGACAAAGATTTAATTTGTTTGCCATTTAGTGTCCTTG
TCTCTATTTGTGAGAAATGAATCATGTCCAATTGTCCATGTTCCATAGAAAAAAAATCTC
CTTCTTTTGTTGGCTCTAGAAATGAAAATTT
