Microarray Probes on PGSC0003DMT400049726
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_20323_PI426222305 |
JHI_St_60k_v1 |
GGCATTCTTCTCGTATGAAGTTCTGAAACAATGAGAGATGAAAGCTCTAAGAAAACCAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049726
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049726 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G63240.1 |
+1 |
0.0 |
727 |
380/551 (69%) |
DNAse I-like superfamily protein | chr3:23364411-23366876 REVERSE LENGTH=547 |
Transcript Sequence (2824 bp)
>PGSC0003DMT400049726 2824 pgsc_dm_v3.4
GCACTTTATTCCCCTTCAAATTTGCCTTGTTAACCAGAACGAGGTATAGAAAATACAACA
TTTTACTTAGTCCCCACAAAGACCCTCTTCTTCTCTCTCTTTCTCTAACATTTTCTTCTT
CTATGGTTCTTGAATCCAACAGTCATTAATTCTGTGTTTTGCCCATTTGAGATTCTTGCT
TCCTTTTATACTTTGCATACAATGCACACCAACTGTCACATCTTCCTTATCCAGAATTAT
TTTCTTTTCATTACTTCTGGGGCCTATTTGACTATAATCTCCTAAATGTTCTTTGTTTTT
ATGCTTCAAGATTGCTCCTTTTTGTTCATTCTTGATCTTTAAACTCATACCCAACAACCC
CATTTCATTGAATTGAAAAGAAAATCCCAAAGTTGAGTGATTCTTGGAGAAATTTGTTTT
GATTCTTGATCTCATTCAAATCCATTTTTGGGCAAAAAAAAAGAAGCAGAAAGATTTGAT
CTTTATTACCCACAATTACTGGGCATTCTTCTCGTATGAAGTTCTGAAACAATGAGAGAT
GAAAGCTCTAAGAAAACCAAGCTCTCGTGGCCTAAGAGTCTGGTGAAGAAATGGTTTAAT
ATCAGGAGCAAAGCTGAGGACTTTCAAGCTGATGATATTGTCTATGGAGGTGTTGATGAT
GAATGGAGGAACAACTTATCAGAGAGGCAGGCATCCACTATTAAGAAAAGCAAAACAGAT
AAGTCAAGTAGAAGGAATGCTGATCGTTTTCATCGAAGTAAGATTGACCTTGACACTACA
GAAGTTACAGATGTGAATAACTACCGGGTCTTTGTAGCAACATGGAATGTGGCTGGAAAA
TCTCCACCTAGTAATTTAAGTCTTGATGATTGGCTTCATACCTCACCTCCTGCTGACATC
TATGTTCTGGGGTTTCAAGAAATTGTTCCTTTGAATGCTGGTAATGTTTTGGGGACAGAA
GATAATGGCCCAGCTAGAAAATGGCTAGCACTCATTCGAAAAACTCTTAACAGTCTTCCC
GGAGCAAGTGGTGGTTATCGTACGCCCTCTCCAGTTCCTAATCCTGTTGTTGAGCTAGAT
GCTGACTTTGAGGGATCGGTAAGAGAAGAAGCCCCATCTTTCTTCCACCGTCGCTCATTT
CAGACGCTAAGCCGTAGCATGAGAGCAATGGAGAGTGAAATGTCAATGCCACGGGCTCAA
CTTGATCGGCGGTTTAGTGTTTGTGATAGAGGTGTCTTTGGGGGAAGGCCAAGTGATTAT
GACCCATATGCGCAATGGGGTGGTTCCTCTGATGATGAAAATTGTCCAGATGATTCTTCA
CCAGTTACAACCCACTATTCCCCAATTTCGTACAGTGGTTCCATCACTTTAGAGGACAAA
GACAGACAGCCATCGAAATCAAGATATTGTCTTGTTGCGAGTAAGCAAATGGTTGGAATA
TTTCTTACTATTTGGATTAGAAGTGATCTAAGGGACGATGTTCGCAATCTGAAAGTATCT
TGTGTTGGCAGAGGATTGATGGGTTATCTTGGGAACAAGGGCTCAATCTCAGTTAGCATG
TCGCTGCATCAAACAAGCTTCTGCTTCATTTGTAGTCATTTAACATCTGGACAGAAAGAG
GGAGATGAGCTACGGAGAAACTCTGATGTCTTGGAGATTCTAAAGAAAACAAGGTTTCCA
AGGGTTCATGGCATTGGGGATGACAACTCTCCTCAAACAATCCTCGAGCATGATCGGATT
ATATGGCTTGGGGATTTGAACTATCGGATTGCCTTGTCTTACCGAACTGCCAAGGCACTG
GTGGAGATGCGCAATTGGAGGGTGCTGTTAGAAAATGATCAGCTACGGATAGAGCAGATG
ATGGGACGTGTTTTTAATGGATGGAGTGAAGGAAGAATATACTTCCCTCCAACATACAAG
TACTCAAGTAATTCCGACAGATATGCTGGAGAGGACACACACCCAAAAGAGAAACGAAGA
ACCCCTGCTTGGTGTGATCGCATATTATGGTATGGTCAAGGCCTATATCAAATATCTTAT
GTTCGTGGAGAGTCCAGATTCTCAGATCATAGACCAGTTTATAGTATACTCTTGGCTGAG
GTCGAGTCCATCAACCGCCATCGCATAAAGAAAAATTTGAGTTGCGCTAGCTCTAGGGTT
GAAGTTGAAGAGTTATTGCCCCCTTCATATGGATATGATGGATACTATTACTAAGAATAC
AGATCTTCAATGAAGAATCCTATCCACAGAACTCCATATTCAGCAGATGCCTTTAGGTCA
GGAAGTCAAGACTTGGAGTTTTGAACTTTATGCTTCAAAATTTAGAGGAAAATTCTTAGC
AAGACACTGCAAAATGAGAGGACTTCAGAAGGGATAATTTTGCTATATGATATATCTGCA
GAGCTTCTGCCTTGAGTCAGGAGTGGAGCAGAGCAGTTCTGCCAGATATAATGTGGTTAC
AGACAAGCAAGATGTAAGAAATGTTGAGACCGGTCTCTTATTCCAAAATGCAGCATCGAT
CAATTGTTATAGCTCTTAATACAAGGATATGCTTATGTATACATCAGGTGACACAGAGAG
AAACTCTTGAGAAGGTGCTATGGCTAAGCAAAGAATTCACTCCGATGCAAATCAACTTTC
TCAAGGTGCTTCATATCTCTTTTGAGGACTAAAAGGAACGCCCTGATACAAAAAATGATG
AAAGTTGATGCATTGAGTCCTTCCACTCTTTATTTTTTGTGGAGCTTTATGTTCTATTTG
GAGAAAAAGAAACTTTGGTTTGTGCTCATTGTCACAGACAAATAAGATACTATGTTGTTG
GGGG
