Microarray Probes on PGSC0003DMT400049512
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37634_PI426222305 |
JHI_St_60k_v1 |
TACATAGAAGGAAATGCACCGGGTGGTGATTTCACTCCTAGCCAATCTGCACAGATTACA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049512
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049512 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G27290.1 |
+1 |
0.0 |
818 |
405/736 (55%) |
S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783 |
Transcript Sequence (2538 bp)
>PGSC0003DMT400049512 2538 pgsc_dm_v3.4
ATGAGCGGTAATGGCTGGGGAAGGGGGCAAGTACATCCTTTTGTTCTCAGTTCGTGGGAA
TTGCTTCCATCACTAACCAGTTCAGCTCGGCTAGTGGGCTTTTGTGTTCGAACCTCGAAT
CCGGACCTGTTCGACAAGACCAGATCCATCAACAAACCTAGGTCCAATATTTGCGTCTAC
GAGCTAGCCATCAACAGACGGACATCCTTTTACCGCAGTCTTCCCCTATTGGGCATAGAC
TTTTCTACGTTAGGCTCCTGTAAGGGCGGCATTGGCGCTACAGATACCATAAGTACAACC
CACTTTCTGAAAGATGGTGATGCCAATATTACTTCACCTGATGGAACCTTTGAAATGGGG
TTTTTCAGTTCAGGTAGTTCCAAAAATCGCTACGTGGGTATGTGGTACAAAAGCTTATCT
GTTAGGACAGTGGTGTGGGTTGCCAACAGAGAAGCTCCCTTGACCAGTGGATCAGGTATC
CTTAAGGTTATTGAGCCAGGACGTCTCGTCCTTCTCAATGACACTAACAAAGTTGTATGG
TCAACTAATACCTCTACATCTGTGCAGAATCCCATTGCACAGTTGCTGGATTCTGGGAAT
CTTGTCGTGAAACAAGCTGGTGATGATAATTTCCTTTGGCAGAGTTTTGATCACCCAACT
GATACACTATTACCAGGCATGAAGCTTGGTTGGAACTTTTTAACTCACAGAGAGGTGTAC
TTGTCATCGTGGAAGACCCAAGAGGATCCAGCTCCAGGTGATTATACATATCACTGTGAT
CCTTCTGGATATCCACAGAACATCCTGAAGAAGGGGTCAAATGTTGTCTATCGATCAGGG
CCGTGGAATGGTCTTCATTTTAGTGGAACAAGAAACCCAAGAGGCAGTCATTTATACAAA
TATGAGATATTCTCAAGTAAGACACAGGTTTATTTTGGATATAAGCTCATATCTTCAGTT
ATCACAAGGTTGATACTTAATCAGAATGGTGCCCTAAAACTTTGGACTTGGGGTGATCAT
GTATCTGATTGGATCCCTCAACTCTCAATACCCGCAGATAACTGTGATGCTTACAAACTG
TGTGGCGCATACGGGACTTGCAACAGTCAAGATTTTACTGTATGTAGATGCTTAGACAGA
TTTGTGCCCAACAATAGTGAAGCTTGGAAGAAGAGAAACTGGTCAGGTGGCTGTGTTCGG
AAAACAGAACTAAATTGCCTTCAAGGACATAGATTTTTGAAGTATTCACATATCAAATTG
CCAGACACACGGAATTCCTGGTCCGATGTGACTATGACACTTGAAGAATGCAAGAATACC
TGCTCTAAAAATTGCTCTTGTATGGCTTATGCAAATCCTGACATACGCAATGGAGGAAGT
GGATGCTTGTTGTGGTTCGAGGATCTGCTTGACATTAAGGTGGTTTCCGATGAAGGTCAA
GATATCTACATAAGAATGGCTGCTTCTGAACCAGGTAGGTCCGGACGCAATGGCAACTAC
AAGATGGATCATAGTGGTAATTGTGAGGAAGAATTTGAGATACCAATGTTTGACTTATCT
ACCATAATGAAGGCTACCAATAACTTTTCAATAGACAGAAAGATTGGAGAGGGGGGCTTT
GGACCGGTTTACAAGGGCATACTTGAAGGACGGGAAATAGCTGTCAAACGGCTGTCCAGA
ACTTCCAAACAAGGAGAAGGTGAGTTCAAGAATGAAGTTTTATATGTTGCAAGACTTCAG
CACAGGAATCTGGTGAAGATTCTTGGTTGCTGCAGTGACGGGGAAGAAAAGATGTTGATC
TATGAGTACTTGCCGAATGGGAGTCTTGATTCATTTATATTTGATGACACACAAAGCAAG
GCATTAGACTGGCCTAAGCGATTTCACATTATCAATGGTATAGCTCGGGGACTTATGTAT
CTGCATCAAGATTCTCAATTGAGAATAATTCACAGAGACCTGAAAGCTAACAACATTCTG
CTAGACAAGGACATGAATCCAAAGATATTAGACTTCGGCTTGGCAAAAATATGTGAAGAG
GATGACATTGGAGCCATGACAAACCGAGTAGTTGGAACATATGGGTACCTCTCACCGGAA
TATGCATTGCACGGAAAATACTCAGTAAAATCAGATGTATTTAGCTTTGGTATTTTAGTA
TTGGAAATTGTCAGTGGGAAAAGCAACAGAAAATTCTCTCATCCAGATCATAACCTTAAT
CTACTCGGGCATGCATGGAAACTTTATATACAAGGTAGGTCAATAGAACTACTTGATGAA
TGCCTAGGTGATTCTTGTTCAACATCTGAAGTGGTACGATCAATTAGTGTTGGTTTATTA
TGTGTCCAACAATGTCCTGAAGATCGTCTAAGTATGTCTTCCGCAGTTCTGATGTTAAAC
AATGAAGGTGTGTTGCCGTTGGCTAAACAACCAGGTTTTTACATAGAAGGAAATGCACCG
GGTGGTGATTTCACTCCTAGCCAATCTGCACAGATTACAGTGAGTGACACCCCCATCACA
ATACTAGCTGCTCGATAG
