Microarray Probes on PGSC0003DMT400049192
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_19941_PI426222305 |
JHI_St_60k_v1 |
GGAAGTTACTGTGTATATATGCCAATTGGTAAAACATAACACAGTAAATACCCTATGTCC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049192
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049192 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G55970.1 |
+1 |
1e-155 |
451 |
222/365 (61%) |
jasmonate-regulated gene 21 | chr3:20766970-20769264 REVERSE LENGTH=363 |
Transcript Sequence (1513 bp)
>PGSC0003DMT400049192 1513 pgsc_dm_v3.4
CGATAATATAAAATCTCCTTTTTAGCTCCTCTCTCTATATATACATATGGCTTTGAATTC
ATGAAAATCACGTTCTCAAGCTCACGTCAACTTCGAAAAATCTTTTTCATCATTATTATC
ATCCACAATCAAAGACTTTTAAGCCTCATACAATCACAACCACAACCACAACCTATCTTG
TAAAGTGCTACAAATATATCTAGCGCTAGTTATAACAGTTAGGAGTACTGAACAAACGAA
ATAAACATGAGTAATTGCTTGCAAAGCTGGCCGGAGCCAATTGTCCGAGTTCAAGGACTC
TCGGAAAGTGGCATTCGAGAAATCCCCGACCGGTACGTGAAACGACCAGCGGATCGTCCA
TGTTTCAAGGAGACAACAACGTTGTCGTCATCATCACATGTACTTGATAATATTCCGTTA
ATTAACCTTGAAAACTTGAAGTCATTGGATGAATCCATTCGCGATGAGACAATAGAACTC
ATTTCCAAGGCTTGTCGCGAATGGGGTTTCTTCCAGGTGGTGAACCACGGCGTTAGTCAT
GAACTCATGGCTAACGCACGTGGTGTCTGGCAGGAGTTCTTTCATCTCCCGCCAGAGGAA
AAGCAGAAGTTTGCGAATTCACCGGTTACTTATGAAGGATATGGAAGCAGACTTGGAGTG
GAAAAAGGTGGAAAATTGGATTGGAGTGATTATTTCTTCCTTCATTATCTCCCTGAGCCT
TTGAGGGATGACAAAAAATGGCCTTCCCTTCCCATTACATGCAGGAAAATAATTGCTGAA
TATGGACAAGAAGTAGTGAAATTATGTCGAAAAATAACAAATATCTTGTCGATTAACCTT
GGATTAAATGAAAATTATCTACACACAAAATTTGGTGGAGACAATGAAAGAGGTGCATGT
TTAAGGGTTAATTTTTACCCTAAATGTCCCCAGCCTGACCTAACACTTGGACTCTCTTCC
CACTCTGATCCTGGTGGCATGACCCTTCTCCTCCCCGACACCGACGTCCCCGGCCTCCAA
GTCCGTCGTGGTGATGACTGGATAACGGTTAAGCCGGTTCCTAATGCCTTCATTGTTAAT
ATTGGAGATCAAATTCAGGTACTAAGCAATGCAATATACAAGAGCATAGAGCATCGTGTG
ATCGTTAATTCAGGGAAAGAACGTGTCTCTTTAGCATTTTTCTACAATCCAGGAGGTGAC
ATCCTAATTAAACCTGCAGATGAACTTGTGACGGAGGATCAGCCGGCGTTATATTTACCG
ACGACGTTCAACGAGTATCGAGCTTTCATTAGAACCAACGGACCTAGAGGAAAATCTCAA
GTTGAATCACTAAAATCGCCAAGATAAATGTCCTTTAGCATGACCCTGATACGCACAAAA
CGAGAAATGATCCAATTAAATTACCTTTTATATGTCCTATATATAGTATTTAGGAAGTTA
CTGTGTATATATGCCAATTGGTAAAACATAACACAGTAAATACCCTATGTCCTATGTGAT
GTAATAATACAAT
