Microarray Probes on PGSC0003DMT400049172
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_19939_PI426222305 |
JHI_St_60k_v1 |
CCATTTCTGATGGAACAATAAGGTAGGCTGATTTTTTGGGTTCATTTATTAGGAGAAAAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049172
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049172 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G13780.1 |
+1 |
0.0 |
485 |
233/285 (82%) |
methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative | chr4:7993366-7998433 REVERSE LENGTH=797 |
Transcript Sequence (2063 bp)
>PGSC0003DMT400049172 2063 pgsc_dm_v3.4
ACTAAGTGTACATTGGATGTGGTAGAAAGTTTTACAAACTGCTTAAATCTTAGCTTGCTC
ACTCAACAGGTTTGTTGCAACACTCCTTGTATCCGAGATACAGATCATTTGTTTCTTGAG
CTCCCTTTGTTGAAGGATCAGTTAGAAGCATATATCAACGACACGTCCGGGGGATGGAGT
CAGAATGCTATCCATATAACAGATGCGTGGTTTAAAGATGGACTTAATCCAAGGTGTATA
ACTAGAGATTTGAAATGGGGAGTTCCAGTACCACATGAAAAATACAAGGATAAGGTTTTC
TATGTATGGTATGATACTCCTATTGGATATGTATCAATCACCTCATGCTACACAACTGAG
TGGGAGAAGTGGTGGAAGAATCCAGATAATGTGGAGTTGTATCAGTTTATGGGCAAGGAC
AATGTGTCTTTTCACACTGTATTATTCCCATCTGCACTTCTTGGAACTGGTGAAAGCTGG
ACACTTCTGAAAATTATCAGTGCAACGGAGTACTTGAACTATGAAGCAGGAAAATTCTCA
AAGAGCAAGGGTGTAGGAGTTTTTGGTAATGATGTAAAAGATACAAATATTCCTGTAGAA
GTATGGAGATATTACCTGCTAACAAACAGGCCAGAGGTCTCAGACTCTTTGTTTTCGTGG
GCAGACCTACAAGTGAAGTTAAACAGTGAGTTGCTAAGCAACTTAGGCAATTTTGTCAAT
AGAGTCCTGAGTTTCATCGCAAAAGATCCAGACTCAGGTTATGGTTCTATTATTCCCGAC
GCTGAAGGAGCAGAATCACATTCCTTGACAAAGGCATTGGGTGAAAAAGTTAGAAGTCGT
GTTCAGCAATATGTAGAAGCCATGGAGAAGGTTAAATTGAAGCAAGGCTTGAAGGTCGCT
ATGTCTATTTCTAGTAGGAAACGGTTATCTGCAGGCGAGCCAATTTTGGAAGCTTTACAA
GGAAGACAGGCCTTCCTGTTCGATAGTGATGAGAACTGCTTGTGGTCTAGTATATCTTCT
AGCATGTCTTTTAGAGCCATTTATGCCATCTTTTTCACGAGAGGTGCTTAAGCAGCTCAA
CATGCCTCCTGAAACACAATTTTCACTGTCTGATGAAGGAGGTGACATTGAAAATGGCAA
AAGACCATGGGATATTCTATCTGCAGGTCACAAAATTGGAACACCAGCACCATTGTTCAA
AGAGCTGAAAGATGAAGAAGCTGAATTCTACAGAAATAAGTTTGCTGGAAGTCAGGCAGA
TAGGGCAGATAGGGCTCTGAAGGCAGAAACTGAGGCCAAAGAGATGGCTAAACAATTGAA
GAAAGCAAAAATATCAGATGGTAATAAGAAGAAGGAACGTGCAACAAAATCTTCTGAAAC
CAAATCTAAGGCCCCAGCCTCTATTGAAGGAGGCATTTCCATTAGTAGACTCGACATTCG
TGTTGGCCTCATAACCAAAGCGCAGAAACATCCTGATGCTGATTCGTTGTACGTGGAAGA
GATTGATGTTGGTGAAGCTCTGCCCAGAACTGTTGTTAGTGGCCTTGTAAAGTATATTCC
ACTTGAGGAGATGCAGAATCGGAAGGTCTGTGTTCTATGCAACCTAAAACCAGCTAGCAT
GAGGGGGATAAAGTCCCAGGCAATGGTTCTTGCCACTTCTAATAGTGATCACACTAAGGT
TGAATTGGTCGAGCCACCAAAAGATGCTGTGATTGGGGAATGAGTTACATTCCTCGGGTT
TGATGGCAAACCTGACGATGTCTTGAACCCTAAGAAGAAAGTTTGGGAGACAGTTCAGGT
GGATTTACATACCAATAAGGAGTTAGTTGCCTGCTACAAAGATGTGCCATTCACCACATC
AGTTGGTATTTGCAAGGTTGCTTCCATTTCTGATGGAACAATAAGGTAGGCTGATTTTTT
GGGTTCATTTATTAGGAGAAAACAATGTAACTAACACATTTAAAGTTTTTTCTTCTTTAG
TGCTATGATAGTAATCTATCATCTTTTACTGTTATCAATTGTTCATAATATTACTATAAT
AGCAAGTTTTGATTCTATTAAAC
