Microarray Probes on PGSC0003DMT400049067
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42185_PI426222305 |
JHI_St_60k_v1 |
TATTTTCGTTTTCTAGACCGTAGCTGGGAAATGTTGCTTGCAAAGTTACCAGTATGTTGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049067
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049067 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G34930.1 |
+1 |
6e-105 |
350 |
302/958 (32%) |
disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905 |
Transcript Sequence (2799 bp)
>PGSC0003DMT400049067 2799 pgsc_dm_v3.4
ATGAAAGTGTTAACAATAACACTATGGGTTCTCTTGTTTTTTATTTTGACAAATACCAAG
TTTGTTGTTTGTGTAGGGATTTGCAGAGAAAATGAGCAACGAGCGTTGGAGATCTTGAAG
AAAGAAGTATATGATCCCTCGAATATTCTCTCTTCTTGGGTTGTCGGAAAAGATTGTTGT
GAATGGGAAGGGGTGGTGTGCAACAATCTCACTCGTCATGTGATTGAGCTAAGCATTTAT
GTTGATATGTTTGATTCGAGATATCTAAGGATCAATAACCTAGAGTGGTTAACAAGTCTT
TCGAGTCTTGAGAACCTGGAGATAGAAAGTGTTGATCTTAGCAAAGCTAATGAATGGCTA
CAGGTTATTAACATGCTTCCTTCTCTTGTTTATCTTCATTTATACAATTGTAGTCTTCAT
CATATAACACCTCTACTTGATCATAAAAAAATTTCTTCACTCAAATCTCTCGATCTTTCT
GGGAATTACAACTTAAATTCTTCTGTTCCGAAATGGGTTTTCAACCTCCCCAATCTTGTT
TCTCTTGACCTGAGTGGCTGTAATTTTACTGGCCCGTTTCCTGATGGTCCAGTTAACTTG
ACTTCTTTCACAACCTTCGAGGCTTCTGGAAATCGTTTCAACTGTCGTTTACCTAAATGG
TTGTTTGATTTGAATAATCTTGAACATGTTGTGCTCTATGGTAGTGGCATTGAAGGTGCG
ATACAGAGTAAGAGCGGAAACATAACAAAACTTAAATATCTTGATCTTTCTTTCAATAAC
CTCAACTCCACTATACCAAATTGGCTCTATGGATGCAAAGATCTAGAATCACTTTTCCTT
GGTGGAAATCATCTTGAGGGAACAGTTTCAAGTCTGATTTCAAATTTGAGCTCAATAACT
ATTATTGACCTTTCTGGTAATATGCTTTCTGGAAAGTTACCGAATGTAATTGGAAAGTTA
GGGAAATTAGAACAACTTGATCTCACAGGAAATCAATTTGAGGGAGATATATCTGAATTA
TTCAATGTTAAGAGTAATTTCCTTTCAGTGGGATTGGGAAATACTTCTTTAACATTTTTG
AGACTAGATGATAATAAACTCACAGGAGCTCTTCCGGAAAGTGTTGGCCAACTTTCAATG
CTAGAAGTCTTTTCCATCTCTAACAATAGGTTGGAAGGTGTTGTAACAGAAAGTCATTTC
TCTAAATTAACACATTTACAAACCTTCTATGCATCTAGAAATAATCTGACTTTAAAAGTG
AGTCGGAATTGGATTCCACCTTTTCAAGTCATAGATATTGAAATAGGCGGCTGGAATATA
GGCCCGTTGTTTCCAATGTGGCTCCGAACTCAAAAGCAGATAGCAAATGTTGACATATCA
GATGGTGGAATACAAGGTGAGGTTCCAACTTGGTTTTGGAAATTGTCTTCTCAAATTGAA
TTTCTCAATATTTCTCACAACCAATTTGTTGGTGAGGTTCCAATCATCTCGACACCTTCG
TGGACGGATGGACATGGAGGTCCTTGGACAATGTGCTTTGGTTCCAACAATTTTAGTGGA
CCATTGCCCTTGATTTCAACCATTGTAACTGAGCTAGATCTCTCAAACAATTCTTTTTCC
AAAGGTTTATCGAATTTTTTGTGTGAAGCAAAGAATGGATCTTACAAATTGGAGATCTTA
AATCTCGGGGGAAATGATTTATCAGAAGAAATTCCTGATTGTTGGATGAATTGGCCAGAG
TTGAAAGTTTTAATCTTGAGGGACAATAATTTGATTGGAAGCTTACCAAGATCTATCGAG
GTTTTGAGTAATTTGTTATGCTTAGACTTCCGAAGAAATAGACTTAACGGTCCGTTTCCT
TCATCCTTGGAAAACTGCTCAAAACTGCATAAAATAGATTTAGCTGAGAATGAGTTTTTT
GGAAAATTACCATCTTGGTTGGGAATGAGGTTTACAACCTTGATAGTTCTTATCCTTCGG
TCCAATAAATTCGATGGTGAATTGCCTAAAGAACTATGTCACCTCAAAGATCTTCAGATC
TTAGACCTTGCAAACAATACATTTGTTGGAATCATACCAAGGTGTATTGGCAATTTCAGT
GCAATGATCAAAGGAAAAAAGAAAGTACTGGAAGATGATTTTGAGTTAAATTATTCCTTT
TATTATGGAACTTTGATAGAGAGTGCAATGGTGACAACTAAAGGCAATATGTACCAGTAT
GACACAATTTTGGCGTTGTTTACAAGTATGGATATGTCTAGCAATAATCTTTCTGGAGAT
ATTCCTATAAGTCTAACACGTCTTGCAGGATTAAGATCATTTAATCTTTCCAAAAATAAC
CTAACTGGAAGGATTCCAAATGACATTGGTGACATGAAAGTCTTGGAATCTGTTGATCTT
TCAGAAAACCAACTTTACGGTCAAATCCCACAAAGTTTTTCGAGTTTGTCTACTTTGAGC
TACTTGAATCTATCTGATAACAATTTGTCAGGTATGATACCATTGAGTACTCAACTTCAA
AGCTTTGATCCCACGAGTTTTCAAGGAAACAAGCTCTGTGGGCTCCCGCTCTTGGTGAAC
TGCAGTTCAGATGGCAATATTCCAAATCACAAGTATGAAGATGATGAGAGTGACAAAGAT
GAAGTGGATTGGTTTTACATTTCAATGGCTATTGGATTCGCACTAAGCTTTTGGGGTGTT
TGTGGTTCATTGCTTTTCAAGAGATCATGGAGACATGCTTATTTTCGTTTTCTAGACCGT
AGCTGGGAAATGTTGCTTGCAAAGTTACCAGTATGTTGA
