Microarray Probes on PGSC0003DMT400048964
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_51535_PI426222305 |
JHI_St_60k_v1 |
CGATAGTTTACCTAGCTCCATAGTTCACGTTTAGTTACAGAATGATGTAACGGATAAAGC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400048964
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400048964 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G78600.2 |
+3 |
8e-85 |
267 |
148/288 (51%) |
light-regulated zinc finger protein 1 | chr1:29567370-29568662 FORWARD LENGTH=319 |
Transcript Sequence (1419 bp)
>PGSC0003DMT400048964 1419 pgsc_dm_v3.4
TGTTGAAAAAAATTATAATTTAAAGGATGAAGATTCAGTGTAATGTGTGTGAGGTAGCAG
AGGCAAAAGTATTATGTTGTGCTGATGAAGCAGCACTTTGTTGGTATTGTGATGATAAAG
TTCATGCTGCAAATAAGCTTGCTAATAAGCATCAAAGAGTACCTCTTTCTGCTTCATCTT
CACCCATGCCGAAGTGTGACATATGCCAAGAGACTGTTGGCTTTTTCTTTTGCCTCGAGG
ATAGGGCTTTGCTCTGCAGAAAATGCGACATTTCTATTCACACCGTCAATGCTTATGTCT
CATCTCACCAGAGGTTCTTGCTGACCGGAGTCAAAGTGGGACTTGAACCTCTCGGTCCTT
CTGCATCAGCATCCTCAGGAAAGTCGCCTTCTATCCAGAAGGTCGCGGAGCAAGAATCTC
CTCCAATTCCGAAGAGTGTTGCTCCTCTGTCATCAGCTACTCCATCTGAAGGTGTATTAC
CTGTCCATACTAGTGGGAATGGGAATTTTGCACCTAGTAGACTTCCAATGGTTGGAGGTT
CTGCAGCTGGAATCATTCCACAATGGCAATTTGATCAGTATCTTGGAATGGGTGATTTCA
ATCAGAATTACGGATACATGGATTATGGACAATCTAAGGCAGACAACGGAAAGCTTGGAG
AATCAGCTAGTTCTCCGTTCTTAAGAGATGCTGACGCTGAAGTTGCAGGTGACGAGTGCT
TTAGCACTGAGGTGGCAGATACATGTTGGGCAGTCCCACAAATTCCTTCGCCACCAACAG
CTTCTGGACTAAACTGGCCGACGAAAACTATCCAGAATCCGTTTGATGCTGCATTGTTGG
AATCCGATGCTAGTTACTTCCCTTTGCAGAACATTCAAGATCAACAATCAAATGGTTCCG
GTTCCAAAAGGAGTAGGCATTTCTAGCACATCCTCCTTAAGTTTCGTATGTTAGGTAGTG
AATAAAGTGTTTCATGCACTAATCTTTGTTAGATAGATATTATCGGCAAGTGTTATTTTA
CATCTAATCCCCTTTTTAAGTTGTCTTCCTTACAAGACGGTGCTATAGATGATATCCTGA
TAACTGCTCCCAGTACGTGGTCGTGAAAAGAGTCGTCATACACGAGACACCAGTGGGTTT
TTCAGGGTAACTGGAAACCAGCACAACATCTTCATACTCTTCTCTGATTGACGTGGGTGG
TTGCTCAGACTTCAAGGTATAAACGAAGTGGCGTACGGTACATGTGGAGGTATTGTCTGG
TTTTTGCTATCACGTGAACGTGGAGTTAGTCCAGTTTTTAATACCTGCTGTACCTTAATA
AGTTTATGATATCGTTCAAATATTACAAGTTTTGTATCTCGATAGTTTACCTAGCTCCAT
AGTTCACGTTTAGTTACAGAATGATGTAACGGATAAAGC
