Microarray Probes on PGSC0003DMT400048796
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_46284_PI426222305 |
JHI_St_60k_v1 |
GCTACCGTTCTTGCCCAGACAAGGTATATAGGGAACTCGAAACAAATGACTCAAATCTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400048796
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400048796 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G78950.1 |
+1 |
0.0 |
1231 |
572/759 (75%) |
Terpenoid cyclases family protein | chr1:29684558-29688673 REVERSE LENGTH=759 |
Transcript Sequence (2286 bp)
>PGSC0003DMT400048796 2286 pgsc_dm_v3.4
ATGTGGAAATTGAAGATTGCTGAAGGGCAAAAAGGGCCATATTTGTACAGCACAAACAAC
TATGTTGGACGACAAACGTGGGAGTTCGATCCAAATGCTGGAACGATAGAAGAACGGGCT
GAGATAGAAGAGGCCCGCCAACAATTTTGGAATAATCGTTATAAAGTCAAGCCTAGTAGT
GATCTTCTTTGGCGAATGCAGTTTCTTGGAGAGAAAAATTTCAAACAAATAATTCCAGCA
GTAAAAGTTGAAGAAGATGAAGAAATTAGTCATGAAGTTGCTACAATTGCATTGCATAGA
GCAGTTAATTTCTTCTCAGCTTTACAGGCTAGTGATGGTCATTGGCCTGCTGAAAATGCT
GGTCCTTTGTTTTTTCTTCCACCTTTGGTCATGTGTATGTATATCACTGGGCATCTTAAT
ACTGTATTCCCAGCTGAACATCGAAAGGAAATTCTTCGGTATTTATATTGTCATCAGAAC
GAAGATGGTGGATGGGGTTTGCACATAGAAGGCCACAGTACTATGTTCTGTACAGCTCTG
AGTTACATTTGCATGAGGATCCTTGGAGAAGGACCAGATGGCGGTGTAAATAATGCGTGT
GCTAGAGCAAGGAAATGGATTCTTGATCATGGTAGTGTCACCGCAATTCCTTCTTGGGGA
AAAACATGGCTCTCGATTCTTGGAGTTTTTGAATGGATAGGAACCAATCCAATGCCACCT
GAGTTTTGGATTCTTCCATCTTTTCTTCCCGTGCATCCAGCAAAAATGTGGTGTTACTGT
CGAATGGTCTACATGCCGATGTCTTACCTCTATGGGAAGAGATTTGTTGGTCCAATCACG
CCTCTCATTTTGCAACTGAGGGAAGAGTTATATGATCAACCATACAATGAAATTAACTGG
AAAAAAGTGCGCCATGTATGTGCAAAGGAGGATCTCTATTACCCTCATCCATTGGTTCAA
GATTTGATGTGGGACAGTCTCTACATATGTACCGAGCCTCTATTGACCCGTTGGCCTTTC
AACAAGCTGAGAAACAAAGCTCTTGAAGTTACCATGAAACACATACACTATGAAGACGAG
AATAGTCGATACATCACCATTGGATGTGTCGAAAAAGTATTGTGCATGCTTGCTTGTTGG
GTCGAGGATCCTAACGGCGATTATTTCAAAAAACATCTTGCTAGGATCCCTGATTATTTA
TGGGTAGCTGAAGATGGAATGAAAATGCAGAGTTTTGGTAGTCAAGAATGGGATACCGGT
TTTGCTATTCAAGCACTATTGGCCAGTGAGATGAATGATGAGATAGCAGATACTCTTAGG
AAAGGACATGACTTTATAAAACAATCTCAGGTGACGGACAATCCTTCTGGTGATTTCAAA
GGGATGTATCGACATATCTCAAAAGGATCGTGGACTTTTTCAGATCAAGATCATGGATGG
CAAGTCTCTGATTGCACTGCTGAAGCATTAAAGTGCTGCCTTCTGTTCTCTACAATGCCT
CGTGAATTAGTCGGTCAGGCAATGGAACCAGGGCGACTGTATGACTCGGTGAATGTTATT
CTTTCATTACAGAGCAAAAATGGCGGTTTAGCAGCATGGGAACCTGCAGGAGCCTCTGAG
TATTTGGAGCTGCTCAATCCTACTGAATTTTTTGCGGACATTGTCATTGAGCATGAGTAT
GTCGAATGCACTGCCTCATCAATTCAAGCACTTGTTCTGTTTAAGAAGCTGTACCCCGGA
CACAGAACCAAGGAGATTAACATATTCATTGATAATGCTGTTAAATATCTTGAAGATGTA
CAAATGCCTGATGGTTCATGGTATGGTAACTGGGGTGTTTGCTTCACATATGGTTCCTGG
TTTGCTCTTGGAGGGCTTGCTGCAGCAGGCAAGTCCTACAACAACTGTGCAGCTGTTCGT
AAAGGCGTTGAATTTCTGCTAAGAACACAAAGGTCCGATGGTGGTTGGGGTGAAAGCTAC
CGTTCTTGCCCAGACAAGGTATATAGGGAACTCGAAACAAATGACTCAAATCTTGTACAA
ACTGCATGGGCATTGATGGGATTGATTCACTCTGGCCAGGTTGATAGAGATCCAAGGCCC
CTCCACCGCGCAGCAAAGCTGTTGATTAATTCTCAGATGGAAGATGGTGACTTCCCACAG
CAGGAAATTACTGGAGTTTTTATGAAGAATTGCATGTTGCATTATGCAGCATACAGAAAT
ATATATCCATTATGGGGTTTGGCAGAATATCGCAAAAATGTCCTATTACCATTAGAAAAC
AACTAA
