Microarray Probes on PGSC0003DMT400048698
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_46932_PI426222305 |
JHI_St_60k_v1 |
GGTTTCAGGTTTTGGACGTACATATTTTGCCAAGGATGAATCAATTGGATTCTTAATCAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400048698
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400048698 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G31350.1 |
+2 |
8e-97 |
301 |
192/379 (51%) |
KAR-UP F-box 1 | chr1:11221519-11222706 REVERSE LENGTH=395 |
Transcript Sequence (1441 bp)
>PGSC0003DMT400048698 1441 pgsc_dm_v3.4
GTCTATTTATTCAATTCTCGGACGATCTTCAACTTTCCCTTTGCTATTTTAAGGCCACTA
TTGTACCTCACACACGGCTTCACATTTTTCCTCTCAAATGAACAACTCCGCCACCATCAC
TGTCGCAGCCGCAGATACAGCAGCCGGAGCTGCTGTAAAACGCCGGAAAAAACTTCATCA
ACATCATCAGTATGAGTCCTTGATTCTTGGACTTCCTGATGATATAGCTCAGATTTGTCT
TTCTCATGTTCAACCTTCAACTCTTTACTCCGTTTGTCAATCATGGCGTCGGCTTGTTTA
TTCTCCTTCGTTTCCCCCCTTTTTATCCATATATTCTCTACTGAAGCCATCTAAATCTGA
GGAGAACTCCGTTCAGTTCGCGAATTTCGATCCGATTTCAGCAAAATGGAATTTACTTCC
TCCGCCTCCACTTAATCCACCTCTCCGTCTCCTTCTCCGTCACCGTTCGTTCATCTCCCG
ACACCTTCCGATTCAATCGGTAAGCGTTTCCGGCAATTTTATACTCCTCGCCGCGACGAC
TGACCCTTTGCTCCCGGCCTTATCTCGTCCTCTTGTTTTCAACCCGCTTACTCGTAAATG
GACCTCCGGTCCCCGGTTCAAAACTCCGAGACGATGGTGCGTTGCGGGCGCGTCGCAGGG
CGTGGTGTTTGTTGCGAGTGGGATTGGGTCAAGCTATAACCCAGAGGTAGCTCGATCAGT
TGGAAAGTGGGACCTGAAAAGTAACTGCACAAAGTACAGCTGTAACCATCACGATAGAAA
CAAGGTCTGGAAATGGGAGAAAATGAGTGGTCTCAAGGATGGGAAGTTCAGTAGGGAAGC
GATTGAAGCAGTAGGCTGGAGAGGGAAGCTCTGTATGGTAAACGTGAAAGGCGATGCAGC
GAAAGAAGGAATAATCTACGACGTCGGAAGTGACACGTGGCAGGAGATGCCGGAGGGGAT
GTTGGTTGGATGGAGAGGTCCGGTGGCGGCGATGGAGGAGGAAGTTATTTATACGGTGGA
TGAATCGAAAGGAGCATTGAGAAAGTATGATCCAGGAAGTGATAGTTGGATTATGATTTT
GGAAAATGAGATGCTTAAAGGTGCACAACATATGGCTGCTGCCGGCGGTAGAGTTTGCGT
GGTTTGTGGCGGCGGTGATGGGATAGCGGTGGTGGATGTGACGGCTGAGCCGCCGAGTTT
GGTGGTGGTGGAAACTCCGGTGGGGTTTCAGGTTTTGGACGTACATATTTTGCCAAGGAT
GAATCAATTGGATTCTTAATCAAAAGATGAATATTGAATAATAGTGTATTATTTCCAATT
TTTTAGTAATATTTTTTAGGTATATTTGGGATTATATATTTTTTGAAACGTTTTCACTTT
ATCATACTTTCTCACACGTTAAGGAGTGTACTGTTTTCTATATTAACAATGGCATTTTCA
C
