Microarray Probes on PGSC0003DMT400048452
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18141_PI426222305 |
JHI_St_60k_v1 |
CTTGGCTTCTCCTTTTTTAATTGGAGTAAGTCGAAATGGTTCTCTGATATTAGTAAGATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400048452
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400048452 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G08570.1 |
+1 |
6e-86 |
269 |
147/209 (70%) |
atypical CYS HIS rich thioredoxin 4 | chr1:2713059-2714312 FORWARD LENGTH=275 |
Transcript Sequence (1504 bp)
>PGSC0003DMT400048452 1504 pgsc_dm_v3.4
ATTTGATCCACCTGTCGCTTTGTCTCTCGCCTTTTTCCCTTTTACGTCAATCTTGAAATC
TCCATTAACAAGATAAACTAAGAACAGAAGAAAGAAAAGGAGAATAACCCTTTTTCAGAT
TTCCAGTTTCTTCATCAGGGTCGATTGCAAATTTTGTGTCTCTTTTGGTTTTTATTTTTA
TGTTGAGGTGTTTGTTTGAGAATTTGAGATCGTTTGAAAAGGAAAGCCATGATGAAATTG
ATGAGCAAAGGTTTTATGTTTCCTTCGTCTTCTGATTGTGGTGAAATTTATCATCATCGT
CCTCTTAATCTACCTGGGATCTGTTCTTTTCCCAATAAATCGGTCAATCTTTCTTGTCTT
CCTTCGTTGAACCTTTCATCTTCTTGTTTGCCAAGAACCGATTTTTATGGTCGTAGATTG
GTTATAAATGAAGGCGTATCCAAGTTCAACCGAAGAAATTCCCAAGTTGTTGATATCACT
GCTCAGATGAGTATTGGAATCAGGAAAGCACAGAAATGGTGGGAGAAAGGGGTTCAACCT
AACATGAAAGAGGTGAACAGTGCACAAGAACTTGTTGACTCTCTTTTGAGTGCAGGGGAC
AAATTAGTTGTTGTTGATTTCTTTTCCCCTGGCTGTGGAGGTTGTAAAGCTCTTCACCCC
AAGTTGTGTCAGCTGGCAGAGATGAATCCAGATGTGCATTTTTTACAGGTGAACTATGAG
GAACACAAGTCGATGTGTTACTCTCTTAATGTACATGTTCTCCCATTTTTCCGTTTCTAT
AGAGGAGCTGAAGGCCGTGTTTGCAGCTTTAGCTGTACCAATGCCACGATCAAAAAATTC
AAAGATGCACTGGCGAAGTATGGTACAGATCGTTGCACCCTTGGGCCGCCAAAAGGGCTG
GAGGAGAAAGAGCTACTTGCACTGGCAGCTAACAAGGATCTCTCCTTTAATTACACTCCA
AAAACAGAAGAAGCACCCGTCCTTGTTACCTCACAAAAGGAAGTTCAGGATACAACTCCT
CCAAATATAGAGTCCCCTCTACCACTTCCTCTTCCTCTCCCCATTGCGTCAACTAGCTCA
CAGACGGCCAAACGGGATACAGAGAAAGAAGCATATGCTACTTCTGGTAGATGATTTTAA
AATTTGTGGTAAATGATGTTGAAGAGGTTATATCTGTACAGCTATATATATTATGCTTTG
TTGTGTTATAAGACGACTGCAGTCTGGAGTAACTTAAATATTAGTATAGGGAATGTGAAA
TATTTACTGGCTACTGCTGGGTATAATCTGGTCTTGTACATAGTTAATGTGGAAGCTCTG
GTATATATGTGAAGCCTGAGCGATAGCGAGAGTCCACTCTTCCCTTTTACTTGGCTTCTC
CTTTTTTAATTGGAGTAAGTCGAAATGGTTCTCTGATATTAGTAAGATGTTTGTACTGTT
TTTTGATCTCTTTGTTATTGAGTAATGATAATATGATTGTCTTTTTTATTCTCCTGTTTC
TGAC
