Microarray Probes on PGSC0003DMT400047948
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_45899_PI426222305 |
JHI_St_60k_v1 |
AATTGTCAGTGTTGATGTTGCTCAGGTTGGATCGTCGAACTGGAACTTCTTGACCCGAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400047948
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400047948 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G45970.1 |
+1 |
4e-118 |
346 |
165/245 (67%) |
expansin-like A1 | chr3:16896238-16897189 FORWARD LENGTH=265 |
Transcript Sequence (1043 bp)
>PGSC0003DMT400047948 1043 pgsc_dm_v3.4
CATTTACTCACTCAAAACAATTCATTCTTCAAATCAAATCCTTTAAACAAAAAAATGTCT
CTCTTCTTCCTTGTCTTCCTTCTTTTTGTCTCTTCTGTTATAGCCTGCGATCGCTGTGTT
CACCAATCCAAAGTTGCTTATTTTTCCAGTGCTTCTGCTCTTCTCTCGGGTGCGTGTGGT
TATGGAAATTTAGCAATAGGCTTCAATGGAGGTCGACTTGCCGCTGCTGTTCCTAAACTT
TACAATAATGGTGCTGGATGTGGTGCTTGTTATCAGATAAGATGTAAGGACCCAAAAATT
TGTTCAAAACATGGAACAACTGTAATGGTTACTGATCTAAATACGAATAACCAGACTGAT
TTTGTGATCAGTAGCAGAGCTTTTATGGCTATGGCCATTGAGGGAAAAGCTAAAGACGTT
CTCAAATTGGGAATCGCCGATGTTGAATACAAAAGAGTTCCTTGTGATTACAAAGGCAAG
AATTTGGCTGTTCGAGTAGATGAATCAAGCCAGAAGCCATATTACCTAGCAATTAGCATC
TTCTACCAGGGTGGTCAAACTGAAATTGTCAGTGTTGATGTTGCTCAGGTTGGATCGTCG
AACTGGAACTTCTTGACCCGAAACCACGGAGCAATTTGGGACACAAGCAGAGTGCCAAGT
GGGGCATTGCAATTTAGGTTTGTGGTGACAGCAGGGTACGATGGCAAGTGGATTTGGGCT
AAATCAGTGCTGCCATCAGATTGGAAAATGGGGGTGATTTATGATACTGGAGTTCAAATC
ACTGACATTGCTCAAGAGGGTTGTTCCCCATGTGATGATGGAAGTTGGAAAACTTAATTA
GTTTTTTTTTTCTCTTCTTCTTAACTGTAACAATTCGTGTGAATACACACACACAGAGAA
TATTTAATAAAATTATAGATTGATTCAGTTTGAGTAGACATAGGGATACAAATTAAATTC
CTATTCTTTCTTGTTTAAGTCATATTAGTACTGTAACATCACATTCTTTTCGCTATCCAG
AACATTGATTAATGATATATCTC
