Microarray Probes on PGSC0003DMT400047823
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_4412_PI426222305 |
JHI_St_60k_v1 |
GCCAAAGGTCAAAAACTGTTTGATTTTTCTCACATTCCACTCTTGTTTTCTGCATTAGTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400047823
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400047823 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G57850.1 |
+3 |
6e-138 |
411 |
207/307 (67%) |
D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein | chr5:23435548-23437287 REVERSE LENGTH=373 |
Transcript Sequence (1916 bp)
>PGSC0003DMT400047823 1916 pgsc_dm_v3.4
TGACTATCATATTGCTATGTTGTAGTACTGTTTTGTTACTATTTGTTGTTTCTTGTACTT
CGATTATTTCTTTTTTTGGACTGTTTTTCTTGAGCTAAGGGTCTATGGGAAACAACCTCT
CTACCTCTGAGGTAGGGGTAAGGTCTATGTATAATCTGCCCTCCCCAGATCCCACTTTGT
GGGACTACACTGGTACGTTGTTGTTGTACATAGTCTACTACTAAAGTTAATGCCATGTGA
TCAGGTGGTCACGGGTTCGAGCTATGGAAACAACCTCTTGTAGAAATGCAAAGTAAGACT
GTACGATAGACCATAGACCCTTGTAGTCCGGTCCTTTCCCGGACCCGTGCATAGCAGGAG
CTTAATGCACCTGGCTTCCCTCTTACATCGTCCACTTTGTTGTCTGTCTTGATAAGCTTC
ATTTCTCTTTCTTAGCACCTTCTTCAGAACAGATTATCCGAAACTTACATGTCCTGTATG
ATCACAAATCCTGGTTTTCACTAGAAATAAGGAAAGTAATAGGACAAGAAGAAAAAAGAT
AAACCTGGTTTCTGCATTGTGTAATGCTAAAAGATGATAACCACAAAGTACCTATGAATA
ATCGATAAATTACCGGGAATACTTCATAGAGCACATAAACCTTGTAGCTGATATCGATAA
AGGGGGCTTCTCAAAAGTAAATGATCTTTATTTTCACTGTAAAGGTTATTGAGAGGATGA
GAACAAGTCGAGAAGGTCACAACACCAAGCAGCTTTATTTGGCAATGTACTCGAGCGTTT
TTGGTGGAATCACAACTGATACAGCTGCCATGGTGATCCCCATGGATGATCACATGGTTC
ATAGAGGGCATGGTATCTTTGATACTGCTGCCATTATGGATGGATACCTTTATGAGTTGG
ACCAACACCTTGATCGTTTCCTGGGATCTGCAACCATGGCCAAAATACAAATTCCTTTCG
ATAGGGAAAGCATTAGACGGATTCTCATCCATACAGTAAGTGTTTCCAAGTGCAGAGAAG
GTTCTTTAAGATACTGGCTTTCGGCAGGACCTGGTGATTTTCAACTATCTTCATCCGGCT
GTCACCAAGCAACTCTGTATGCCATTGTAATTAAAGATCAATCACCTCCTGACCACAGGG
GCATTAGAGTTGTAACGTCATCCATCCCGATTAAACCCCCACAGTTTGCTGTCATGAAAA
GTGTTAATTATCTTCCGAATGCACTTTCCAAGATGGAAGCAGAAGAAAATGATGCATATG
CAGCAATTTGGTTGGATGGCGATGGCTTTGTTGCAGAAGGCCCGAACATGAACGTGGCTT
TTGTTACAAAGGAAAAGGACTTTCTGATGCCTTGTTTTGACAAAATTCTCAGTGGCTGTA
CAGCTAAAAGAGTTGTGGTTCTTGCAGAAAATCTAGTAAAGGAAGGTAAACTTCGGGGTA
TTAGAGTAGAGAATGTGTCTGTAGAGGACGCGAAAAGAGCAGATGAGATGATGCTAATTG
GTAGTGGGGTTCTTGTACGCTCAGTGGTGCAGTGGGATGAAGAAGTCATCGGTAATGGTA
GAGAAGGTCCTGTGACACAAGCTCTGCTAAATCTTCTCTTGGAGGATATGAAGTCAGGGC
CTCCCACGGTGCGAGTTCCCGTTCCCTATTGATGAGCAGAGGCCGAACTCAGTAGCGTTT
GCTCAAACAGTATATTCATAAAAGATTGAATAATCTCACTCATCAAGTCTTATAGGAATT
AGGAAAATAAGGTTTCTAATGGCTCTTCATATGAATGAAAGTTGTATTATGGCCAAAGGT
CAAAAACTGTTTGATTTTTCTCACATTCCACTCTTGTTTTCTGCATTAGTTAAAAATATG
ATGTAGATATCAATGAAATGTATAACTTTTACAAATCATAAATATGCATATCAAAA
