Microarray Probes on PGSC0003DMT400047822
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_4470_PI426222305 |
JHI_St_60k_v1 |
GCCAAAGGTCAAAAACTGTTTGATTTTTCTCACATTCCACTCTTGTTTTCTGCATTAGTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400047822
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400047822 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G57850.1 |
+2 |
9e-144 |
421 |
218/339 (64%) |
D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein | chr5:23435548-23437287 REVERSE LENGTH=373 |
Transcript Sequence (1474 bp)
>PGSC0003DMT400047822 1474 pgsc_dm_v3.4
TATTTCAAGAAGTTATGATTATTTATGCCACTTTTTTCACACAAAATTTGTAAAATTAGC
TAAAGATACAATGGCTTCTTTACCAACTCTCACAAAACCCATCTCAGAAACTTCATTTTT
TCTACCAAAATTAAGCAATTTGGAATTTTCAAGATCAAAGATTAGACCTTTAACCAGATC
CAATGTTTTCAAGAACTCAACTTTTTCCTCTGATGGACAATATGGTCCAACCTTTGATGT
TCCACTTCTTTCTTGCTCAGAGGTTATTGAGAGGATGAGAACAAGTCGAGAAGGTCACAA
CACCAAGCAGCTTTATTTGGCAATGTACTCGAGCGTTTTTGGTGGAATCACAACTGATAC
AGCTGCCATGGTGATCCCCATGGATGATCACATGGTTCATAGAGGGCATGGTATCTTTGA
TACTGCTGCCATTATGGATGGATACCTTTATGAGTTGGACCAACACCTTGATCGTTTCCT
GGGATCTGCAACCATGGCCAAAATACAAATTCCTTTCGATAGGGAAAGCATTAGACGGAT
TCTCATCCATACAGTAAGTGTTTCCAAGTGCAGAGAAGGTTCTTTAAGATACTGGCTTTC
GGCAGGACCTGGTGATTTTCAACTATCTTCATCCGGCTGTCACCAAGCAACTCTGTATGC
CATTGTAATTAAAGATCAATCACCTCCTGACCACAGGGGCATTAGAGTTGTAACGTCATC
CATCCCGATTAAACCCCCACAGTTTGCTGTCATGAAAAGTGTTAATTATCTTCCGAATGC
ACTTTCCAAGATGGAAGCAGAAGAAAATGATGCATATGCAGCAATTTGGTTGGATGGCGA
TGGCTTTGTTGCAGAAGGCCCGAACATGAACGTGGCTTTTGTTACAAAGGAAAAGGACTT
TCTGATGCCTTGTTTTGACAAAATTCTCAGTGGCTGTACAGCTAAAAGAGTTGTGGTTCT
TGCAGAAAATCTAGTAAAGGAAGGTAAACTTCGGGGTATTAGAGTAGAGAATGTGTCTGT
AGAGGACGCGAAAAGAGCAGATGAGATGATGCTAATTGGTAGTGGGGTTCTTGTACGCTC
AGTGGTGCAGTGGGATGAAGAAGTCATCGGTAATGGTAGAGAAGGTCCTGTGACACAAGC
TCTGCTAAATCTTCTCTTGGAGGATATGAAGTCAGGGCCTCCCACGGTGCGAGTTCCCGT
TCCCTATTGATGAGCAGAGGCCGAACTCAGTAGCGTTTGCTCAAACAGTATATTCATAAA
AGATTGAATAATCTCACTCATCAAGTCTTATAGGAATTAGGAAAATAAGGTTTCTAATGG
CTCTTCATATGAATGAAAGTTGTATTATGGCCAAAGGTCAAAAACTGTTTGATTTTTCTC
ACATTCCACTCTTGTTTTCTGCATTAGTTAAAAATATGATGTAGATATCAATGAAATGTA
TAACTTTTACAAATCATAAATATGCATATCAAAA
