Microarray Probes on PGSC0003DMT400047821
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_4576_PI426222305 |
JHI_St_60k_v1 |
GCCAAAGGTCAAAAACTGTTTGATTTTTCTCACATTCCACTCTTGTTTTCTGCATTAGTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400047821
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400047821 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G57850.1 |
+3 |
1e-137 |
411 |
207/307 (67%) |
D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein | chr5:23435548-23437287 REVERSE LENGTH=373 |
Transcript Sequence (1982 bp)
>PGSC0003DMT400047821 1982 pgsc_dm_v3.4
GAATATACCAAACTGTATAGTGTGTGGAAATGTGGAAAGTAAGAATTAAAGAGTTGCTGG
AAAAGGAAACATATGTTCTTTTTTAAACGGACCAGTGTAATCCCACAGCGTGATGTTTGG
GGAGGTTAGAGTGTACAAATACTTTACCTCTACCTCCGAGGTGAGGTAGAATGGATGTTT
CCGATGGACACTCGGCTCAAGACAAAAACATTTTAAATAAAGATGTAATGGAAGTATCAG
AACAGTTGTATAACAATAATTGAACTGCGCACTAAATAACTGATAGTAACCTAAATTGAT
GAACAAGAAACTACAAAAAGTAGAACTATGCCTACTAGTAAGTGCGACAAGCCAATACGT
TCCTACTTACTCGTGTAGATGCACTCCTTTATTGGGGCTTTAAGTGCAAATAAAGGATGG
ACTTTAATGAAAAAAGGCGCAAAGGGAGAAAAAAATATAAATATACATTATTAGTCAAAA
CTAATATATAAGCTTGAATGACGAGTATATGAACAAAGAAATTGAAGAAAAATTACGATG
AAGTGAAATACCAATTTCTTAGTGTCGCCTCTTTAGAAGATGCTCATTCACAAGGAAAAG
TGTGCCTTAGAACCTTAACGACGACACTGAAGCGCACACTAAGTGAGGTGAAGCGCTCAA
CACATTTTGAGCCTCGTTTTAGGGATTAAGCACGCCTTTGATGGCACTGGTTTTAAAATA
AAAGAAGATTAGCTTTTGTAAATTCAGGTTGCTCAAGGCATTTTCCAAAGGTTATTGAGA
GGATGAGAACAAGTCGAGAAGGTCACAACACCAAGCAGCTTTATTTGGCAATGTACTCGA
GCGTTTTTGGTGGAATCACAACTGATACAGCTGCCATGGTGATCCCCATGGATGATCACA
TGGTTCATAGAGGGCATGGTATCTTTGATACTGCTGCCATTATGGATGGATACCTTTATG
AGTTGGACCAACACCTTGATCGTTTCCTGGGATCTGCAACCATGGCCAAAATACAAATTC
CTTTCGATAGGGAAAGCATTAGACGGATTCTCATCCATACAGTAAGTGTTTCCAAGTGCA
GAGAAGGTTCTTTAAGATACTGGCTTTCGGCAGGACCTGGTGATTTTCAACTATCTTCAT
CCGGCTGTCACCAAGCAACTCTGTATGCCATTGTAATTAAAGATCAATCACCTCCTGACC
ACAGGGGCATTAGAGTTGTAACGTCATCCATCCCGATTAAACCCCCACAGTTTGCTGTCA
TGAAAAGTGTTAATTATCTTCCGAATGCACTTTCCAAGATGGAAGCAGAAGAAAATGATG
CATATGCAGCAATTTGGTTGGATGGCGATGGCTTTGTTGCAGAAGGCCCGAACATGAACG
TGGCTTTTGTTACAAAGGAAAAGGACTTTCTGATGCCTTGTTTTGACAAAATTCTCAGTG
GCTGTACAGCTAAAAGAGTTGTGGTTCTTGCAGAAAATCTAGTAAAGGAAGGTAAACTTC
GGGGTATTAGAGTAGAGAATGTGTCTGTAGAGGACGCGAAAAGAGCAGATGAGATGATGC
TAATTGGTAGTGGGGTTCTTGTACGCTCAGTGGTGCAGTGGGATGAAGAAGTCATCGGTA
ATGGTAGAGAAGGTCCTGTGACACAAGCTCTGCTAAATCTTCTCTTGGAGGATATGAAGT
CAGGGCCTCCCACGGTGCGAGTTCCCGTTCCCTATTGATGAGCAGAGGCCGAACTCAGTA
GCGTTTGCTCAAACAGTATATTCATAAAAGATTGAATAATCTCACTCATCAAGTCTTATA
GGAATTAGGAAAATAAGGTTTCTAATGGCTCTTCATATGAATGAAAGTTGTATTATGGCC
AAAGGTCAAAAACTGTTTGATTTTTCTCACATTCCACTCTTGTTTTCTGCATTAGTTAAA
AATATGATGTAGATATCAATGAAATGTATAACTTTTACAAATCATAAATATGCATATCAA
AA
