Microarray Probes on PGSC0003DMT400047819
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_4280_PI426222305 |
JHI_St_60k_v1 |
GCCAAAGGTCAAAAACTGTTTGATTTTTCTCACATTCCACTCTTGTTTTCTGCATTAGTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400047819
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400047819 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G57850.1 |
+1 |
2e-106 |
336 |
168/246 (68%) |
D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein | chr5:23435548-23437287 REVERSE LENGTH=373 |
Transcript Sequence (2607 bp)
>PGSC0003DMT400047819 2607 pgsc_dm_v3.4
TGACTATCATATTGCTATGTTGTAGTACTGTTTTGTTACTATTTGTTGTTTCTTGTACTT
CGATTATTTCTTTTTTTGGACTGTTTTTCTTGAGCTAAGGGTCTATGGGAAACAACCTCT
CTACCTCTGAGGTAGGGGTAAGGTCTATGTATAATCTGCCCTCCCCAGATCCCACTTTGT
GGGACTACACTGGTACGTTGTTGTTGTACATAGTCTACTACTAAAGTTAATGCCATGTGA
TCAGGTGGTCACGGGTTCGAGCTATGGAAACAACCTCTTGTAGAAATGCAAAGTAAGACT
GTACGATAGACCATAGACCCTTGTAGTCCGGTCCTTTCCCGGACCCGTGCATAGCAGGAG
CTTAATGCACCTGGCTTCCCTCTTACATCGTCCACTTTGTTGTCTGTCTTGATAAGCTTC
ATTTCTCTTTCTTAGCACCTTCTTCAGAACAGATTATCCGAAACTTACATGTCCTGTATG
ATCACAAATCCTGGTTTTCACTAGAAATAAGGAAAGTAATAGGACAAGAAGAAAAAAGAT
AAACCTGGTTTCTGCATTGTGTAATGCTAAAAGATGATAACCACAAAGTACCTATGAATA
ATCGATAAATTACCGGGAATACTTCATAGAGCACATAAACCTTGTAGCTGATATCGATAA
AGGGGGCTTCTCAAAAGTAAATGATCTTTATTTTCACTGTAAAGGTTATTGAGAGGATGA
GAACAAGTCGAGAAGGTCACAACACCAAGCAGCTTTATTTGGCAATGTACTCGAGCGTTT
TTGGTGGAATCACAACTGATACAGCTGCCATGGTGATCCCCATGGATGATCACATGGTTC
ATAGAGGGCATGGTATCTTTGATACTGCTGCCATTATGGATGGGTTAGCATTTCTAACTA
TAATTTCGGTTCTTTATCTACCAAAGTTTATTTGTTAGATCGAATTTTCATTCCTGTATG
TACCACATATTAAGCCTAAAAAGGGCCTATCATTCCTATAGATTTAGTTGCACTTGATTA
CATTAAACACATATCCAAGTGGCCATGCTCATGTATTTCCTATGATAAAATTTGTCTTCG
TATGAATTCATTGCAAAGTTCGACTAGTCAATTTATTATCCTGCAGTGTTTCATAGAAAT
ATGCTGTTTGGGGATTTCAGATTTGTCAACATGTAAATTGTGATGTAAACTCCTCTACAT
TCGGTGGTATTTCGTACTCGTAAGTTGAGATAGTGAGGTCTGATTTTCGTGCAGATAGAA
CACACTAAAACTTAGATATCTCTCTAACTTGGCCAAATTTTGTTCAATTAGCTCTTCTAG
TTACTCTTGAACCCTTGTCTTTCATTCTATGTTGGGCAAAACCTCCCTTCATAGGATTAT
GAGCAACTCTAAAGTGTCGAACTAATTATATTTCTCTTACGTTCCATGTTGGGAAAACGT
CGATTTATAGTATTAAATTAGATGAACAACTCTTAAGTTGTAATCTACATGACTGTGAAC
AAGAATGAGAAGCTAAAAGATAGTTGAGATTCTTGGACTTTGCTTTATTTGTCTTATTTC
TTATCTACCATCAGATACCTTTATGAGTTGGACCAACACCTTGATCGTTTCCTGGGATCT
GCAACCATGGCCAAAATACAAATTCCTTTCGATAGGGAAAGCATTAGACGGATTCTCATC
CATACAGTAAGTGTTTCCAAGTGCAGAGAAGGTTCTTTAAGATACTGGCTTTCGGCAGGA
CCTGGTGATTTTCAACTATCTTCATCCGGCTGTCACCAAGCAACTCTGTATGCCATTGTA
ATTAAAGATCAATCACCTCCTGACCACAGGGGCATTAGAGTTGTAACGTCATCCATCCCG
ATTAAACCCCCACAGTTTGCTGTCATGAAAAGTGTTAATTATCTTCCGAATGCACTTTCC
AAGATGGAAGCAGAAGAAAATGATGCATATGCAGCAATTTGGTTGGATGGCGATGGCTTT
GTTGCAGAAGGCCCGAACATGAACGTGGCTTTTGTTACAAAGGAAAAGGACTTTCTGATG
CCTTGTTTTGACAAAATTCTCAGTGGCTGTACAGCTAAAAGAGTTGTGGTTCTTGCAGAA
AATCTAGTAAAGGAAGGTAAACTTCGGGGTATTAGAGTAGAGAATGTGTCTGTAGAGGAC
GCGAAAAGAGCAGATGAGATGATGCTAATTGGTAGTGGGGTTCTTGTACGCTCAGTGGTG
CAGTGGGATGAAGAAGTCATCGGTAATGGTAGAGAAGGTCCTGTGACACAAGCTCTGCTA
AATCTTCTCTTGGAGGATATGAAGTCAGGGCCTCCCACGGTGCGAGTTCCCGTTCCCTAT
TGATGAGCAGAGGCCGAACTCAGTAGCGTTTGCTCAAACAGTATATTCATAAAAGATTGA
ATAATCTCACTCATCAAGTCTTATAGGAATTAGGAAAATAAGGTTTCTAATGGCTCTTCA
TATGAATGAAAGTTGTATTATGGCCAAAGGTCAAAAACTGTTTGATTTTTCTCACATTCC
ACTCTTGTTTTCTGCATTAGTTAAAAATATGATGTAGATATCAATGAAATGTATAACTTT
TACAAATCATAAATATGCATATCAAAA
