Microarray Probes on PGSC0003DMT400047370
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_29688_PI426222305 |
JHI_St_60k_v1 |
GTTGTGCAGTACTATGTGTACCTTGTACATTGACCTGTAGAGTTATTAATAGATAGAGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400047370
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400047370 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G47500.1 |
+3 |
2e-82 |
269 |
193/487 (40%) |
cycling DOF factor 3 | chr3:17504276-17505964 REVERSE LENGTH=448 |
Transcript Sequence (1885 bp)
>PGSC0003DMT400047370 1885 pgsc_dm_v3.4
CAAACATCAAAGAAACAAAACAAGAAGATAAAAATTTGTTCCCATCTTACCCTTTTTCAA
GTAACACAAACTACTTTGATTTCTTTCCCCCTTTTTGTGTTGTAAAAAAAAGAAGGAAAA
TCAAGAATTGAGAAGAGGAATTCAAGAAAATGTCTGAAGTTAGAGATCCTGCTATTAAGC
TGTTTGGTAAAACAATTGGTATGACACAACAAGAAACCAATTGTGTTTATCTTCATGATG
ATCATACAACCTCATCCCCTCTTTCAATTGATGATGATAAGATCACTTTAGAAGGAGAAT
TTACACAAAGCAAACAAGATGATGAACTTGTCGATCCAACTGCAGACTCGTCGATTGAAC
CAGAAACATCATCTGGTATAAGCGATGACATCAAGATGCAGGATGCAGATAAAGAAACAT
TATCATCAAAATCTATCGAGGAGGAGGATTCGAGTGAGGAAAAGGCACTCAAGAAGCCTG
ATAAATTGATTCCATGTCCGCGATGTAATAGCATGGAAACAAAGTTCTGTTATTACAACA
ATTACAACGTCAACCAGCCTCGTTACTTCTGCAAGAACTGCCAGAGATATTGGACTGCTG
GAGGGACAATGAGAAATGTGCCTGTGGGATCTGGTCGCCGAAAGAACAAGAGTTCTTCCA
TTTCAAATTATCCTCTTCAAGCAGGTCGGGTCGAAGCAGCAGCTCACGGAATGCATCTTC
CTGCTTTAAGGACAAATGGAACTGTCCTTACATTTGGATCAGATAAACCCCTTTGTGATT
CAATGGTTTCTGCATTGAACTTAGCTGAGAATTCACATAATATGAATCGAAATGAATTCC
ATGGATCCGAACGAAGAATGCCTGCAATCGGGAATGATCAATCAAATGGAACTTGTAGTA
CAGCCTCAAGTGTAACTGACAAAGAAAGCAGTGCTGGTACTCATGATTTAGCAAATTGGA
ATAATTTCCAGCCATTTCCTCCTCAAGTACCGTACTTTCAGGGCGCTCCGTGGCCTTATT
CTGGCTTTCCAGTATCATTCTATCCAGCAACACCGTACTGGGGCTGCACCGTAGCAAACC
CTTGGAACGTACCTTGGCTTTCTTCTGATCAATCATCAGTCCAGAACAACAGTCCTACTT
CACCAACATTAGGAAAACATTCTCGGGATGAAAGCAAGATTGATCCATCACAATCACGGA
GAAGAGATGCTAATTTGCAGAATAGAGAAGGCGAGAGATGTGTACTGATTCCAAAGACAT
TAAGGATTCATGATCCAAATGAAGCGGCTAAAAGCTCTATATGGTCAACACTAGGTATCA
GGAATGAGAAGATTGATTCGGCTCGTGGTACAATGCTCTTCAGTGCCTTCAATCCAAAAG
CTGATCATAGAAATCGCGAACATGACACTTCTTTTGCCCTGCAAGCTAATCCAGCAGCCT
TGTCTAGATCACTTCATTTCCGCGAGAGCACACAATGATAAGACTTACAACATGGTTCAT
AGTTGCCTAGTACCAATCATTGATGTTAGTGCAGCTAACACCTAATCATGGAAATAGTCT
CTTGCAGAAATGCAGGGTAAAGCTGCGTACAATAGACCTTTGTGGACTGGCCCTTCCTCG
GACCTGCGCATAGCGGGTTCTTGTGTCTAGGAGGAGAAGGATACAGTATGCACAGAGTCT
TCAAGTTTTATAGTTGTGCAGTACTATGTGTACCTTGTACATTGACCTGTAGAGTTATTA
ATAGATAGAGATAAATAAGATGCAGCTGAAGTTTTTACTGACTTCTCATATTGATAGTTT
TATTCTGAATATTTACATTATTTTTATGATACTAAATCAATCATATTAATGGGCTTTGTA
CTTCTTGTAAAGATTCACTTTCTTG
